RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 ZNF449Q6P9G9 518 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 ANKRD23Q86SG2 305 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 NCAPG2Q86XI2 1143 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 IGDCC3Q8IVU1 814 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 SPATA18Q8TC71 538 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 TRPM4Q8TD43 1214 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 MCRS1Q96EZ8 462 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 ELOVL4Q9GZR5 314 aa13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 RPF1Q9H9Y2 349 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-202ENST00000429650 IL18RAPO95256 599 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 CBX6O95503 412 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 GABRB2P47870 512 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 ACAP1Q15027 740 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.91□□□□□ -0.185e-12■□□□□ 8.4
SNRNP200-202ENST00000429650 ZNF398Q8TD17 642 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 TRAPPC12Q8WVT3 735 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 PEBP4Q96S96 227 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 VPS11Q9H270 941 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 RSAD1Q9HA92 442 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 GGA3Q9NZ52 723 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 ATP2A2P16615 1042 aaKnown RBP13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 MMRN1Q13201 1228 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 TAF1BQ53T94 588 aaPredicted RBP13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 NPNTQ6UXI9 565 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 CYTH2Q99418 400 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 TBC1D10AQ9BXI6 508 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 SPATC1LQ9H0A9 340 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 MINDY3Q9H8M7 445 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 KANSL3Q9P2N6 904 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 ZFP69BQ9UJL9 534 aa13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNRNP200-202ENST00000429650 M0QYV0 167 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 CILPO75339 1184 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 TROVE2P10155 538 aaKnown RBP eCLIP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ELK3P41970 407 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ROR1Q01973 937 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 MBTD1Q05BQ5 628 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 NOMO1Q15155 1222 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 PLPPR4Q7Z2D5 763 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 FAM13CQ8NE31 585 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 TMEM176AQ96HP8 235 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ZNF570Q96NI8 536 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ASNSD1Q9NWL6 643 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 TNFSF13BQ9Y275 285 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 NUMBLQ9Y6R0 609 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 EVPLQ92817 2033 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 TCRBV9S1A1TA0A576 114 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 TRAFD1O14545 582 aaPredicted RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ENDOD1O94919 500 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ITGB3P05106 788 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 PCK1P35558 622 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 GPD2P43304 727 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 PTK7Q13308 1070 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 CELF3Q5SZQ8 465 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 FAM102AQ5T9C2 384 aaPredicted RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 DARS2Q6PI48 645 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 CYP4V2Q6ZWL3 525 aaPredicted RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 MTDHQ86UE4 582 aaKnown RBP13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 RFWD2Q8NHY2 731 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 PTPRN2Q92932 1015 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 FAXDC2Q96IV6 333 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 ADPGKQ9BRR6 497 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 R3HDMLQ9H3Y0 253 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 MANSC1Q9H8J5 431 aa13.9□□□□□ -0.18
SNRNP200-202ENST00000429650 LACTBL1A8MY62 500 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 KBTBD13C9JR72 458 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 GPR25O00155 361 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 MT-ND3P03897 115 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 STIP1P31948 543 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 RASSF2P50749 326 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 CLCN3P51790 818 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 ZNF143P52747 638 aaPredicted RBP13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 CDH6P55285 790 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 SLC8A3P57103 927 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 OVGP1Q12889 678 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 KCNJ11Q14654 390 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 CTC1Q2NKJ3 1217 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 SH3PXD2AQ5TCZ1 1133 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 CLNKQ7Z7G1 428 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 ZC3H18Q86VM9 953 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 LONP2Q86WA8 852 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 MAB21L3Q8N8X9 362 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 CXorf38Q8TB03 319 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 SLC44A1Q8WWI5 657 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 NKX1-2Q9UD57 310 aaPredicted RBP13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 DCTN4Q9UJW0 460 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 TEX264Q9Y6I9 313 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 IQANK1A0A1B0GTG1 560 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 SOCS7O14512 581 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 LPXNO60711 386 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 PEX11AO75192 247 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 DHRS4L1P0CG22 281 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 EPHB2P29323 1055 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 NEK3P51956 506 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms