RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 GJD3Q8N144 294 aa12.32□□□□□ -0.44
PABPC1P11-201ENST00000428966 NOA1Q8NC60 698 aaKnown RBP12.32□□□□□ -0.44
PABPC1P11-201ENST00000428966 RUBCNQ92622 972 aa12.32□□□□□ -0.44
PABPC1P11-201ENST00000428966 CCDC42Q96M95 316 aa12.32□□□□□ -0.44
PABPC1P11-201ENST00000428966 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
PABPC1P11-201ENST00000428966 SNX25Q9H3E2 840 aa12.32□□□□□ -0.44
PABPC1P11-201ENST00000428966 HMGXB4Q9UGU5 601 aa12.32□□□□□ -0.44
PABPC1P11-201ENST00000428966 CLUHO75153 1309 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 A8MXQ7 604 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 LOC730098B7Z3J9 87 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 XYLBO75191 536 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 ATF6P18850 670 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 HNRNPH3P31942 346 aaKnown RBP12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 ACTN2P35609 894 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 VAV2P52735 878 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 KCNH2Q12809 1159 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 SMARCB1Q12824 385 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 MGAT5BQ3V5L5 792 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 GOLGA6L1Q8N7Z2 621 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 SPPL2BQ8TCT7 592 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 TATDN2Q93075 761 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 SEPT5Q99719 369 aaPredicted RBP12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 NIF3L1Q9GZT8 377 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 HSFX1Q9UBD0 423 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 TRIM10Q9UDY6 481 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 CDH9Q9ULB4 789 aa12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.31□□□□□ -0.44
PABPC1P11-201ENST00000428966 C2CD4DB7Z1M9 353 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 NRG2O14511 850 aaPredicted RBP12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 PMM2O15305 246 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 RHOP08100 348 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 P4HA1P13674 534 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 CYP2F1P24903 491 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 ORC1Q13415 861 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 NFE2Q16621 373 aaPredicted RBP12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 SLC5A9Q2M3M2 681 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 CFAP221Q4G0U5 840 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 TRIM58Q8NG06 486 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 C2orf15Q8WU43 125 aaKnown RBP12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 PCED1BQ96HM7 432 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 PCDHB5Q9Y5E4 795 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 MTCL1Q9Y4B5 1905 aaKnown RBP12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 C2orf16Q68DN1 1984 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 TULP2O00295 520 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 CCR2P41597 374 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 GPR15P49685 360 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 NDST1P52848 882 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 PABPC1LQ4VXU2 614 aaKnown RBP12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 MIIPQ5JXC2 388 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 LMO3Q8TAP4 145 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 GPR152Q8TDT2 470 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 TWNKQ96RR1 684 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 CORO1BQ9BR76 489 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 USTQ9Y2C2 406 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 JRKLQ9Y4A0 524 aa12.3□□□□□ -0.44
PABPC1P11-201ENST00000428966 ENC1O14682 589 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 AFPP02771 609 aaKnown RBP12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 HAPLN1P10915 354 aaPredicted RBP12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 PRLRP16471 622 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 CD58P19256 250 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 ALDH1A3P47895 512 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 TUFMP49411 452 aaKnown RBP12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 INCA1Q0VD86 236 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 MDH1BQ5I0G3 518 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 POTEHQ6S545 545 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 GET4Q7L5D6 327 aaPredicted RBP12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 STKLD1Q8NE28 680 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 ITFG1Q8TB96 612 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 EDEM3Q9BZQ6 932 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 TMEM30AQ9NV96 361 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 DOCK6Q96HP0 2047 aa12.29□□□□□ -0.44
PABPC1P11-201ENST00000428966 PTPN2P17706 415 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 BDNFP23560 247 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 MAN2A1Q16706 1144 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 DDR2Q16832 855 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 WDR44Q5JSH3 913 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 ACOT1Q86TX2 421 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 SPATA2LQ8IUW3 424 aaPredicted RBP12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 PSMG2Q969U7 264 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 TCEAL4Q96EI5 215 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 FUBP3Q96I24 572 aaKnown RBP eCLIP12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 ZNF512Q96ME7 567 aaPredicted RBP12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 MYADMQ96S97 322 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 LRRC3Q9BY71 257 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 CYP3A43Q9HB55 503 aa12.28□□□□□ -0.44
PABPC1P11-201ENST00000428966 NR2E1Q9Y466 385 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms