RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 OSGEPL1Q9H4B0 414 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.26□□□□□ -0.933e-7■■□□□ 14.4
CTNND1-208ENST00000428599 PITPNM2Q9BZ72 1349 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 DDTLA6NHG4 134 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 M0R3G1 203 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 GARTP22102 1010 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 FDFT1P37268 417 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 FNTAP49354 379 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 PRKAA1Q13131 559 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 ZNF677Q86XU0 584 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 CD302Q8IX05 232 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 LRRC71Q8N4P6 559 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 DPP10Q8N608 796 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 CDK5RAP1Q96SZ6 601 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 GRID1Q9ULK0 1009 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 KIF1AQ12756 1690 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 EPHB2P29323 1055 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 BYSLQ13895 437 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 AGAP9Q5VTM2 703 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 METTL16Q86W50 562 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 DPP3Q9NY33 737 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 NCKAP1Q9Y2A7 1128 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 COL3A1P02461 1466 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 SNRPAP09012 282 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 WEE2P0C1S8 567 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 MYBP10242 640 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 FMO5P49326 533 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 ST13P50502 369 aaKnown RBP9.26□□□□□ -0.93
CTNND1-208ENST00000428599 CTXN3Q4LDR2 81 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 SLC35G2Q8TBE7 412 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 SPATA18Q8TC71 538 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 CSGALNACT1Q8TDX6 532 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 RSPH1Q8WYR4 309 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 FOXP3Q9BZS1 431 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 POLE3Q9NRF9 147 aa9.26□□□□□ -0.93
CTNND1-208ENST00000428599 ESYT3A0FGR9 886 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 RHOBTB3O94955 611 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 HLA-DRAP01903 254 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 MUTP22033 750 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 TUBGCP3Q96CW5 907 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 RIT2Q99578 217 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 TMEM8AQ9HCN3 771 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 METTL5Q9NRN9 209 aaKnown RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 SATB2Q9UPW6 733 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 AAR2Q9Y312 384 aaKnown RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 MMP14P50281 582 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ARID5BQ14865 1188 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 KBTBD12Q3ZCT8 623 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 GPAT2Q6NUI2 795 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ADGRA1Q86SQ6 560 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 CDK20Q8IZL9 346 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 POMGNT2Q8NAT1 580 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ST13P5Q8NFI4 369 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 THUMPD3Q9BV44 507 aaKnown RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 BBS2Q9BXC9 721 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 GALNT8Q9NY28 637 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 VPS51Q9UID3 782 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 VPS28Q9UK41 221 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 FBXO10Q9UK96 956 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 AIM2O14862 343 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 PLSCR1O15162 318 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ZC3H11AO75152 810 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 AP1G2O75843 785 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 NFICP08651 508 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 PCNAP12004 261 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 SOX11P35716 441 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 TCF7P36402 384 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 RHOAP61586 193 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 VSNL1P62760 191 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 DDR1Q08345 913 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 CYP51A1Q16850 503 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 RDM1Q8NG50 284 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 AKT1S1Q96B36 256 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 CIPCQ9C0C6 399 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 CLPBQ9H078 707 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 IL1RL2Q9HB29 575 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 STARD7Q9NQZ5 370 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 RAB23Q9ULC3 237 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 PADI4Q9UM07 663 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ARL2BPQ9Y2Y0 163 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 MGAT4DA6NG13 374 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 VEGFAP15692 232 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.25□□□□□ -0.933e-8■■■■□ 24.5
CTNND1-208ENST00000428599 TROAPQ12815 778 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ZNF484Q5JVG2 852 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 TMC7Q7Z402 723 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 GSPT2Q8IYD1 628 aaKnown RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ADI1Q9BV57 179 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 SOX13Q9UN79 622 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 CHMP2BQ9UQN3 213 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 PCDHB2Q9Y5E7 798 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 PPP2R3BQ9Y5P8 575 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 CCDC189A1A4V9 331 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 PTPN3P26045 913 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 MICU2Q8IYU8 434 aa9.25□□□□□ -0.93
CTNND1-208ENST00000428599 ZNF669Q96BR6 464 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-208ENST00000428599 CCT7Q99832 543 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms