RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 BRD9Q9H8M2 597 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 APOBEC3GQ9HC16 384 aaKnown RBP9.69□□□□□ -0.86
SMC1A-203ENST00000428014 TMEM51Q9NW97 253 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 GCNT4Q9P109 453 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 DLGAP2Q9P1A6 1054 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 PCDHGA10Q9Y5H3 936 aa9.69□□□□□ -0.86
SMC1A-203ENST00000428014 TRAV19A0A0A6YYK7 116 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF840PA6NDX5 716 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 SLC9A3R1O14745 358 aaPredicted RBP9.68□□□□□ -0.86
SMC1A-203ENST00000428014 NARSO43776 548 aaKnown RBP9.68□□□□□ -0.86
SMC1A-203ENST00000428014 ATP2C2O75185 946 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 FAM200BP0CF97 657 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 RFX1P22670 979 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 YWHAQP27348 245 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 HOXA6P31267 233 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 PLA2G5P39877 138 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 EIF2DP41214 584 aaKnown RBP9.68□□□□□ -0.86
SMC1A-203ENST00000428014 SLC8A3P57103 927 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 PSMC1P62191 440 aaKnown RBP9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CYP27A1Q02318 531 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 USP4Q13107 963 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CUL2Q13617 745 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 DDR2Q16832 855 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CBWD6Q4V339 395 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CBWD3Q5JTY5 395 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 DGKKQ5KSL6 1271 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CBWD5Q5RIA9 395 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 TADA2BQ86TJ2 420 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 SIX5Q8N196 739 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 ING5Q8WYH8 240 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 TMEM176AQ96HP8 235 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 ZSWIM3Q96MP5 696 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 RPP25Q9BUL9 199 aaKnown RBP9.68□□□□□ -0.86
SMC1A-203ENST00000428014 DUSP16Q9BY84 665 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 SDCBP2Q9H190 292 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CYLDQ9NQC7 956 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 CLIC5Q9NZA1 410 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 TBC1D14Q9P2M4 693 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 FBXO4Q9UKT5 387 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 SCML2Q9UQR0 700 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 SIT1Q9Y3P8 196 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMC1A-203ENST00000428014 USP3Q9Y6I4 520 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 PATJQ8NI35 1801 aa9.68□□□□□ -0.86
SMC1A-203ENST00000428014 TRIM49BA6NDI0 452 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 FAM86C2PA6NEL3 165 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 AFPP02771 609 aaKnown RBP9.67□□□□□ -0.86
SMC1A-203ENST00000428014 CFHP08603 1231 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 SETSIPP0DME0 302 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 VDRP11473 427 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 PTMSP20962 102 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 KIF11P52732 1056 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 CDH8P55286 799 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF77Q15935 545 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 CCDC40Q4G0X9 1142 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 FBXO43Q4G163 708 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 RAB41Q5JT25 222 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 TCERG1LQ5VWI1 586 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 CLEC20AQ6ZU45 233 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 BEND5Q7L4P6 421 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 CCDC186Q7Z3E2 898 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 SCN4BQ8IWT1 228 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 YAF2Q8IY57 180 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 ARHGAP18Q8N392 663 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 ANKRD52Q8NB46 1076 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 ZMIZ2Q8NF64 920 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 ENOX1Q8TC92 643 aaKnown RBP9.67□□□□□ -0.86
SMC1A-203ENST00000428014 GIPC2Q8TF65 315 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 STK32AQ8WU08 396 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 KCTD13Q8WZ19 329 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 SEMA4DQ92854 862 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 USP13Q92995 863 aaPredicted RBP9.67□□□□□ -0.86
SMC1A-203ENST00000428014 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 CYFIP2Q96F07 1278 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 FAM84AQ96KN4 292 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 NT5C1BQ96P26 610 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 KXD1Q9BQD3 176 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 ZNF518BQ9C0D4 1074 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 DPEP3Q9H4B8 488 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 TBC1D17Q9HA65 648 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 LTB4R2Q9NPC1 389 aa9.67□□□□□ -0.86
SMC1A-203ENST00000428014 TLR8Q9NR97 1041 aaKnown RBP9.67□□□□□ -0.86
SMC1A-203ENST00000428014 E2F8A0AVK6 867 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 SHISA7A6NL88 538 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 HHLA1C9JL84 531 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 TRDMT1O14717 391 aaKnown RBP9.66□□□□□ -0.86
SMC1A-203ENST00000428014 AP1G2O75843 785 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 SOAT2O75908 522 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 PRAMEF12O95522 483 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 HDCP19113 662 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 EEF1GP26641 437 aaKnown RBP9.66□□□□□ -0.86
SMC1A-203ENST00000428014 GDI1P31150 447 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 SLC5A3P53794 718 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 BCAT1P54687 386 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 RAD23BP54727 409 aa9.66□□□□□ -0.86
SMC1A-203ENST00000428014 LRRC32Q14392 662 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms