RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 NR1H3Q13133 447 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 ZNF394Q53GI3 561 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 TRIM68Q6AZZ1 485 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 FILIP1Q7Z7B0 1213 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 FUKQ8N0W3 1084 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 SH3RF2Q8TEC5 729 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 NELFBQ8WX92 580 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 HEXIM2Q96MH2 286 aaKnown RBP21.9■■□□□ 1.1
HSPG2-205ENST00000427897 CEP63Q96MT8 703 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 SLC22A12Q96S37 553 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 NACA2Q9H009 215 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 HMGXB4Q9UGU5 601 aa21.9■■□□□ 1.1
HSPG2-205ENST00000427897 CHORDC1Q9UHD1 332 aaPredicted RBP21.9■■□□□ 1.1
HSPG2-205ENST00000427897 INCA1Q0VD86 236 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 CETN1Q12798 172 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 PON2Q15165 354 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 PAQR9Q6ZVX9 377 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 CPA6Q8N4T0 437 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 SEMA4DQ92854 862 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 FAXDC2Q96IV6 333 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 IER2Q9BTL4 223 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 FBXO44Q9H4M3 255 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 COMMD8Q9NX08 183 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 GCNT4Q9P109 453 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 FBXO4Q9UKT5 387 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 CTNND2Q9UQB3 1225 aa21.89■■□□□ 1.09
HSPG2-205ENST00000427897 MYH10P35580 1976 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 MBL2P11226 248 aaPredicted RBP21.88■■□□□ 1.09
HSPG2-205ENST00000427897 CD44P16070 742 aaKnown RBP21.88■■□□□ 1.09
HSPG2-205ENST00000427897 SLC5A3P53794 718 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 MORC3Q14149 939 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 CAMK4Q16566 473 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 DGKKQ5KSL6 1271 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 SCAMP5Q8TAC9 235 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 OVCA2Q8WZ82 227 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 ATP2A3Q93084 1043 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 JAKMIP2Q96AA8 810 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 FAM83CQ9BQN1 747 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 TMEM30AQ9NV96 361 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 ARHGAP26Q9UNA1 814 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 R4GN57 208 aa21.88■■□□□ 1.09
HSPG2-205ENST00000427897 COL4A2P08572 1712 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 PROB1E7EW31 1015 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 CILPO75339 1184 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 FGFR1OPO95684 399 aaKnown RBP21.87■■□□□ 1.09
HSPG2-205ENST00000427897 CHRNB1P11230 501 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 ARSAP15289 507 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 STX17P56962 302 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 YWHAEP62258 255 aaKnown RBP21.87■■□□□ 1.09
HSPG2-205ENST00000427897 GRSF1Q12849 480 aaKnown RBP eCLIP21.87■■□□□ 1.09
HSPG2-205ENST00000427897 MTAPQ13126 283 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 CBWD6Q4V339 395 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 CBWD3Q5JTY5 395 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 CBWD5Q5RIA9 395 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 ZC3H3Q8IXZ2 948 aaKnown RBP21.87■■□□□ 1.09
HSPG2-205ENST00000427897 OSCP1Q8WVF1 389 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 HNRNPABQ99729 332 aaKnown RBP21.87■■□□□ 1.09
HSPG2-205ENST00000427897 SMOQ99835 787 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 CHRDQ9H2X0 955 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 SEMA4AQ9H3S1 761 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 CISHQ9NSE2 258 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 WNT6Q9Y6F9 365 aa21.87■■□□□ 1.09
HSPG2-205ENST00000427897 KIF26AQ9ULI4 1882 aaPredicted RBP21.87■■□□□ 1.09
HSPG2-205ENST00000427897 ANAPC1Q9H1A4 1944 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 SHISA7A6NL88 538 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 PPP1R3GB7ZBB8 358 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 LEFTY2O00292 366 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 CCR3P51677 355 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 SLC8A3P57103 927 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 PAK1Q13153 545 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 FZD5Q13467 585 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 ZNF77Q15935 545 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 HECTD3Q5T447 861 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 DDX42Q86XP3 938 aaKnown RBP eCLIP21.86■■□□□ 1.09
HSPG2-205ENST00000427897 CREBRFQ8IUR6 639 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 TRIML1Q8N9V2 468 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 ATRIPQ8WXE1 791 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 TATDN2Q93075 761 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 TWNKQ96RR1 684 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 RNF38Q9H0F5 515 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 CSNK1G1Q9HCP0 422 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 HPS4Q9NQG7 708 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 TLR8Q9NR97 1041 aaKnown RBP21.86■■□□□ 1.09
HSPG2-205ENST00000427897 SMPD4Q9NXE4 827 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 CPQQ9Y646 472 aa21.86■■□□□ 1.09
HSPG2-205ENST00000427897 BEST1O76090 585 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 GNA14O95837 355 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 CXCL12P48061 93 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 MCCD1P59942 119 aaPredicted RBP21.85■■□□□ 1.09
HSPG2-205ENST00000427897 SLC7A9P82251 487 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 LRMPQ12912 555 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 USP4Q13107 963 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 ZNF528Q3MIS6 628 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 TXNDC11Q6PKC3 985 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 TMEM176AQ96HP8 235 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 ECT2Q9H8V3 914 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 RBM12Q9NTZ6 932 aaKnown RBP21.85■■□□□ 1.09
HSPG2-205ENST00000427897 KIAA1468Q9P260 1216 aa21.85■■□□□ 1.09
HSPG2-205ENST00000427897 SLC9A3R1O14745 358 aaPredicted RBP21.84■■□□□ 1.09
HSPG2-205ENST00000427897 TNFRSF10BO14763 440 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms