RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 CNTN2Q02246 1040 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 OCA2Q04671 838 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 SNAP47Q5SQN1 464 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 LONP2Q86WA8 852 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 OR9Q1Q8NGQ5 310 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 SLC26A4O43511 780 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 RASSF9O75901 435 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 FXR1P51114 621 aaKnown RBP eCLIP13.64□□□□□ -0.23
SPG11-202ENST00000427534 CES3Q6UWW8 571 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 FAM172AQ8WUF8 416 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 COPS5Q92905 334 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 MAP3K14Q99558 947 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 SNX12Q9UMY4 172 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 TGM2P21980 687 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 RGS4P49798 205 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 ERO1BQ86YB8 467 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 THTPAQ9BU02 230 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 ERI2A8K979 691 aaKnown RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 PDZK1P1A8MUH7 402 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 F8W810 466 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 STRNO43815 780 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 H2AFYO75367 372 aaKnown RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 LTFP02788 710 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 GSTM1P09488 218 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 POU1F1P28069 291 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 SH3BGRP55822 239 aaPredicted RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 CUL2Q13617 745 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 DHX34Q14147 1143 aaKnown RBP13.64□□□□□ -0.23
SPG11-202ENST00000427534 SLC47A2Q86VL8 602 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 CAMKK1Q8N5S9 505 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 MTFR1LQ9H019 292 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 TRPM5Q9NZQ8 1165 aa13.64□□□□□ -0.23
SPG11-202ENST00000427534 GMNCA6NCL1 334 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 PHF2O75151 1096 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 POLBP06746 335 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 SKOR1P84550 965 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 KYNUQ16719 465 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 EFHC1Q5JVL4 640 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 TLK2Q86UE8 772 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 COMMD2Q86X83 199 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CYP2W1Q8TAV3 490 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 FEZF2Q8TBJ5 459 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 SERAC1Q96JX3 654 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 OSBPL1AQ9BXW6 950 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 TLR8Q9NR97 1041 aaKnown RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 RBM12Q9NTZ6 932 aaKnown RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 KCND2Q9NZV8 630 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 ADAMTS13Q76LX8 1427 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 GNG14A0A1W2PPG7 69 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 C2orf81A6NN90 581 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CFAP99D6REC4 459 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 SUPT7LO94864 414 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 MYL6P60660 151 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 ZNF229Q9UJW7 825 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 IPPQ9Y573 584 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 GPR75-ASB3A0A0A6YYF3 556 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 GJB6O95452 261 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 BOP1Q14137 746 aaKnown RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 PDK1Q15118 436 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 HIST2H2ACQ16777 129 aaPredicted RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 HIST2H2AA3Q6FI13 130 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 ATP6V1G3Q96LB4 118 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 OSBPL8Q9BZF1 889 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CLASP2O75122 1294 aaKnown RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 GARTP22102 1010 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 GCLCP48506 637 aaPredicted RBP13.63□□□□□ -0.23
SPG11-202ENST00000427534 TKTL1P51854 596 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 SSU72P8A0A1W2PR75 194 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 HALP42357 657 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CDH8P55286 799 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CDC42EP1Q00587 391 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 SGCGQ13326 291 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 MFSD10Q14728 455 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 SDHAF4Q5VUM1 108 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 LPPQ93052 612 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 PKD2L2Q9NZM6 624 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 CNTNAP4Q9C0A0 1308 aa13.63□□□□□ -0.23
SPG11-202ENST00000427534 SUPT20HL2P0C7V6 817 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 INSRRP14616 1297 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 TCF3P15923 654 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 SLC1A1P43005 524 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 PRIM2P49643 509 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 PRPF39Q86UA1 669 aaKnown RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 ZDHHC6Q9H6R6 413 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 WTIPA6NIX2 430 aaPredicted RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 NT5C1B-RDH14C9J2C7 533 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 EFCAB14O75071 495 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 EDRF1Q3B7T1 1238 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 PPM1LQ5SGD2 360 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 KIAA1324Q6UXG2 1013 aaKnown RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 MDM1Q8TC05 714 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 P2RX7Q99572 595 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms