RNA–Protein interactions for RNA: ENST00000426712.1

COPS6-204, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 3

Gene COPS6, Length 716 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-204ENST00000426712 CBWD2Q8IUF1 395 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 WDR49Q8IV35 697 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 CCDC65Q8IXS2 484 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 GLIS3Q8NEA6 775 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 MYLPFQ96A32 169 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 PANK2Q9BZ23 570 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 TMEM30AQ9NV96 361 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 IL37Q9NZH6 218 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 INVSQ9Y283 1065 aa9.45□□□□□ -0.9
COPS6-204ENST00000426712 PCDH15Q96QU1 1955 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 F8VP50 259 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 KHNYNO15037 678 aaKnown RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 EIF3DO15371 548 aaKnown RBP eCLIP9.44□□□□□ -0.9
COPS6-204ENST00000426712 TGFB1I1O43294 461 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 PTPN1P18031 435 aaKnown RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 BCKDHBP21953 392 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 KCNA4P22459 653 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 P2RY2P41231 377 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 STAT6P42226 847 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 SLC6A11P48066 632 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 PSMC1P62191 440 aaKnown RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 EHHADHQ08426 723 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 MESP2Q0VG99 397 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 TAF10Q12962 218 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 PSMD6Q15008 389 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 LMBRD2Q68DH5 695 aaPredicted RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 FAM173BQ6P4H8 233 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 STXBP4Q6ZWJ1 553 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 SFTPA1Q8IWL2 248 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 PHTF2Q8N3S3 785 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 CCDC33Q8N5R6 958 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 IL17RCQ8NAC3 791 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 KDF1Q8NAX2 398 aaPredicted RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 MDGA1Q8NFP4 955 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 TSTD1Q8NFU3 115 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 OVCA2Q8WZ82 227 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 USP28Q96RU2 1077 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 FNBP1Q96RU3 617 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 PNKPQ96T60 521 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 MRPL45Q9BRJ2 306 aaKnown RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 EDEM2Q9BV94 578 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 B3GNT5Q9BYG0 378 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 TNMDQ9H2S6 317 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 HSPBP1Q9NZL4 362 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 EVLQ9UI08 416 aaPredicted RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
COPS6-204ENST00000426712 PLXNB3Q9ULL4 1909 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 PTPRBP23467 1997 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 FAM208BQ5VWN6 2430 aa9.44□□□□□ -0.9
COPS6-204ENST00000426712 SPEGQ15772 3267 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 E2F8A0AVK6 867 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 VPS37CA5D8V6 355 aaPredicted RBP9.43□□□□□ -0.9
COPS6-204ENST00000426712 SGK1O00141 431 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 TNFRSF10BO14763 440 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 ADAM23O75077 832 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 KAT7O95251 611 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 ANXA13P27216 316 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 GBP1P32455 592 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 GRIA2P42262 883 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 NASPP49321 788 aaPredicted RBP9.43□□□□□ -0.9
COPS6-204ENST00000426712 NOVA1P51513 510 aaKnown RBP9.43□□□□□ -0.9
COPS6-204ENST00000426712 CACNA2D1P54289 1103 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 SEC13P55735 322 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 CYP27A1Q02318 531 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 E2F4Q16254 413 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 SH3PXD2AQ5TCZ1 1133 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 EMC10Q5UCC4 262 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 TDRD10Q5VZ19 366 aaKnown RBP9.43□□□□□ -0.9
COPS6-204ENST00000426712 PAQR9Q6ZVX9 377 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 C12orf40Q86WS4 652 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 DDX42Q86XP3 938 aaKnown RBP eCLIP9.43□□□□□ -0.9
COPS6-204ENST00000426712 ETFBKMTQ8IXQ9 262 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 NUP93Q8N1F7 819 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 HPS3Q969F9 1004 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 OTUB2Q96DC9 234 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 ZFRQ96KR1 1074 aaKnown RBP9.43□□□□□ -0.9
COPS6-204ENST00000426712 MMS19Q96T76 1030 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 C7orf25Q9BPX7 421 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 TMEM121BQ9BXQ6 578 aaPredicted RBP9.43□□□□□ -0.9
COPS6-204ENST00000426712 TRIM9Q9C026 710 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 LRRC27Q9C0I9 530 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 XYLT2Q9H1B5 865 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 SNX25Q9H3E2 840 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 VRTNQ9H8Y1 702 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 TMEM9BQ9NQ34 198 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 TBC1D14Q9P2M4 693 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 MBD1Q9UIS9 605 aaPredicted RBP9.43□□□□□ -0.9
COPS6-204ENST00000426712 CPQQ9Y646 472 aa9.43□□□□□ -0.9
COPS6-204ENST00000426712 FAM92AA1XBS5 289 aa9.42□□□□□ -0.9
COPS6-204ENST00000426712 UPK3BL1B0FP48 263 aa9.42□□□□□ -0.9
COPS6-204ENST00000426712 PATE3B3GLJ2 98 aa9.42□□□□□ -0.9
COPS6-204ENST00000426712 UPK3BL2E5RIL1 263 aa9.42□□□□□ -0.9
COPS6-204ENST00000426712 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
COPS6-204ENST00000426712 ALDH1A2O94788 518 aa9.42□□□□□ -0.9
COPS6-204ENST00000426712 RTN3O95197 1032 aaPredicted RBP9.42□□□□□ -0.9
COPS6-204ENST00000426712 KLF8O95600 359 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms