RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 SNX30Q5VWJ9 437 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 CC2D1AQ6P1N0 951 aaPredicted RBP19.57■□□□□ 0.72
MSH5-207ENST00000425703 RALGPS2Q86X27 583 aaPredicted RBP19.57■□□□□ 0.72
MSH5-207ENST00000425703 FAM3CQ92520 227 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 CYFIP2Q96F07 1278 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 SLC22A12Q96S37 553 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 CYP2S1Q96SQ9 504 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 SMOQ99835 787 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 PNPLA8Q9NP80 782 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 CISHQ9NSE2 258 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 FAM49BQ9NUQ9 324 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 RWDD2AQ9UIY3 292 aa19.57■□□□□ 0.72
MSH5-207ENST00000425703 MTF2Q9Y483 593 aaPredicted RBP19.57■□□□□ 0.72
MSH5-207ENST00000425703 COL4A2P08572 1712 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 H0Y858 1186 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 KPNA1P52294 538 aaPredicted RBP19.56■□□□□ 0.72
MSH5-207ENST00000425703 YWHAEP62258 255 aaKnown RBP19.56■□□□□ 0.72
MSH5-207ENST00000425703 SLC7A9P82251 487 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 USP4Q13107 963 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 FZD5Q13467 585 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 CUL2Q13617 745 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 PDGFRLQ15198 375 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 ANGPT1Q15389 498 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 ZNF77Q15935 545 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 ITPRIPL2Q3MIP1 535 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 C1orf210Q8IVY1 113 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 TRIM59Q8IWR1 403 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 ARL14EPQ8N8R7 260 aaPredicted RBP19.56■□□□□ 0.72
MSH5-207ENST00000425703 MLKLQ8NB16 471 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 ZMIZ2Q8NF64 920 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 ATOH1Q92858 354 aaPredicted RBP19.56■□□□□ 0.72
MSH5-207ENST00000425703 TATDN2Q93075 761 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 ZFYVE19Q96K21 471 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 IER2Q9BTL4 223 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 FBXO44Q9H4M3 255 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 GKN1Q9NS71 199 aa19.56■□□□□ 0.72
MSH5-207ENST00000425703 GREB1Q4ZG55 1949 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 DENND4CQ5VZ89 1909 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 OAS1P00973 400 aaKnown RBP19.55■□□□□ 0.72
MSH5-207ENST00000425703 TBXAS1P24557 533 aaPredicted RBP19.55■□□□□ 0.72
MSH5-207ENST00000425703 TUBP50607 506 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 STX17P56962 302 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 MAP3K7CLP57077 242 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 MTF1Q14872 753 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 MAMSTRQ6ZN01 415 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 CLEC20AQ6ZU45 233 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 SCAMP5Q8TAC9 235 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 FBXO32Q969P5 355 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 TMEM176AQ96HP8 235 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 ARID3AQ99856 593 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 SRRTQ9BXP5 876 aaKnown RBP19.55■□□□□ 0.72
MSH5-207ENST00000425703 GTSE1Q9NYZ3 720 aa19.55■□□□□ 0.72
MSH5-207ENST00000425703 SPECC1L-ADORA2AF8WAN1 911 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 BEST1O76090 585 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 ZDHHC11BP0C7U3 371 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 CCDC192P0DO97 292 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 ADORA2BP29275 332 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 CTHP32929 405 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 RAD23BP54727 409 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 SLC4A11Q8NBS3 891 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 RIN3Q8TB24 985 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 SH3RF2Q8TEC5 729 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 OSCP1Q8WVF1 389 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 HEXIM2Q96MH2 286 aaKnown RBP19.54■□□□□ 0.72
MSH5-207ENST00000425703 GBP4Q96PP9 640 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 DUSP16Q9BY84 665 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 OBSL1O75147 1896 aa19.54■□□□□ 0.72
MSH5-207ENST00000425703 COL4A3Q01955 1670 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 HOXD11P31277 338 aaPredicted RBP19.53■□□□□ 0.72
MSH5-207ENST00000425703 AMPD2Q01433 879 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 TNK2Q07912 1038 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 IFRD2Q12894 506 aaPredicted RBP19.53■□□□□ 0.72
MSH5-207ENST00000425703 RUNX3Q13761 415 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 ARHGAP17Q68EM7 881 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 NT5C1BQ96P26 610 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 NUP62CLQ9H1M0 184 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 HPS4Q9NQG7 708 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 LMBRD1Q9NUN5 540 aa19.53■□□□□ 0.72
MSH5-207ENST00000425703 NDRG2Q9UN36 371 aaKnown RBP19.53■□□□□ 0.72
MSH5-207ENST00000425703 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.53■□□□□ 0.72
MSH5-207ENST00000425703 HHLA1C9JL84 531 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 PROB1E7EW31 1015 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 ABL1P00519 1130 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 NBL1P41271 181 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 KCNH2Q12809 1159 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 LRRC32Q14392 662 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 ZNF394Q53GI3 561 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 HECTD3Q5T447 861 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 PPP1R26Q5T8A7 1209 aaPredicted RBP19.52■□□□□ 0.72
MSH5-207ENST00000425703 DDX42Q86XP3 938 aaKnown RBP eCLIP19.52■□□□□ 0.72
MSH5-207ENST00000425703 UBR7Q8N806 425 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 LMO3Q8TAP4 145 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 ATP2A3Q93084 1043 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 UBXN6Q9BZV1 441 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 RNF38Q9H0F5 515 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 CHRDQ9H2X0 955 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 EBF3Q9H4W6 596 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 DUS2Q9NX74 493 aaKnown RBP19.52■□□□□ 0.72
MSH5-207ENST00000425703 FBXO4Q9UKT5 387 aa19.52■□□□□ 0.72
MSH5-207ENST00000425703 KIAA1257Q9ULG3 409 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms