RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 RPLP0P6Q8NHW5 317 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 ACDQ96AP0 544 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 LOXL4Q96JB6 756 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 B3GNT5Q9BYG0 378 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 LINC00597Q9H2U6 94 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 SMYD3Q9H7B4 428 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 EXOC1Q9NV70 894 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 DMAC2Q9NW81 257 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 LRRIQ3A6PVS8 624 aaPredicted RBP18.87■□□□□ 0.61
GPC1-203ENST00000425056 PHACTR2O75167 634 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 TAF10Q12962 218 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 BIRC3Q13489 604 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 ZNF699Q32M78 642 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 PAGE5Q96GU1 130 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 SLITRK1Q96PX8 696 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 HHIPQ96QV1 700 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 RNF38Q9H0F5 515 aa18.87■□□□□ 0.61
GPC1-203ENST00000425056 POLR3BQ9NW08 1133 aaPredicted RBP18.87■□□□□ 0.61
GPC1-203ENST00000425056 CLDN5O00501 218 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 SLC30A4O14863 429 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 C4BPAP04003 597 aaKnown RBP18.86■□□□□ 0.61
GPC1-203ENST00000425056 CCDC192P0DO97 292 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 OPRD1P41143 372 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 RAP1GAPP47736 663 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 PSMD2Q13200 908 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 NCOA4Q13772 614 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 GAB4Q2WGN9 574 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 KMT5BQ4FZB7 885 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 ZNF667Q5HYK9 610 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 CACNA2D4Q7Z3S7 1137 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 FAM35AQ86V20 835 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 OVCA2Q8WZ82 227 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 KCTD10Q9H3F6 313 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 CPQQ9Y646 472 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 SDK1Q7Z5N4 2213 aa18.86■□□□□ 0.61
GPC1-203ENST00000425056 ATP8B3O60423 1300 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.85■□□□□ 0.61
GPC1-203ENST00000425056 AXIN1O15169 862 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 RTN3O95197 1032 aaPredicted RBP18.85■□□□□ 0.61
GPC1-203ENST00000425056 EPN2O95208 641 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 VNN1O95497 513 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 CYP17A1P05093 508 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 MYL1P05976 194 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 PFKFB1P16118 471 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 CDH8P55286 799 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 DMC1Q14565 340 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 SCARA5Q6ZMJ2 495 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 FILIP1Q7Z7B0 1213 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 KBTBD6Q86V97 674 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 NUP93Q8N1F7 819 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 PDZD8Q8NEN9 1154 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 CCDC26Q8TAB7 109 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 TNIP3Q96KP6 325 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 EBF1Q9UH73 591 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 USP25Q9UHP3 1055 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 HPSEQ9Y251 543 aa18.85■□□□□ 0.61
GPC1-203ENST00000425056 DCDC2BA2VCK2 349 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 PDXKO00764 312 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 SLC9A3R1O14745 358 aaPredicted RBP18.84■□□□□ 0.61
GPC1-203ENST00000425056 APBB3O95704 486 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 ABL1P00519 1130 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 CMA1P23946 247 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 YWHAQP27348 245 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 IFRD2Q12894 506 aaPredicted RBP18.84■□□□□ 0.61
GPC1-203ENST00000425056 ZACNQ401N2 412 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 PAQR9Q6ZVX9 377 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 DDX42Q86XP3 938 aaKnown RBP eCLIP18.84■□□□□ 0.61
GPC1-203ENST00000425056 ZC3H10Q96K80 434 aaKnown RBP18.84■□□□□ 0.61
GPC1-203ENST00000425056 SDCBP2Q9H190 292 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 DMAP1Q9NPF5 467 aaPredicted RBP18.84■□□□□ 0.61
GPC1-203ENST00000425056 SMPD4Q9NXE4 827 aa18.84■□□□□ 0.61
GPC1-203ENST00000425056 A0A1B0GVL5 298 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 TNFRSF10BO14763 440 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 GDF9O60383 454 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 NR3C1P04150 777 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 SLC5A3P53794 718 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 DLG4P78352 724 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 ADGRG2Q8IZP9 1017 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 TMC2Q8TDI7 906 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 USP33Q8TEY7 942 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 FBXO32Q969P5 355 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 SMARCD1Q96GM5 515 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 KCNK16Q96T55 309 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 ARRDC1-AS1Q9H2J1 176 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 IL37Q9NZH6 218 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 CFAP97Q9P2B7 532 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 PCDHGA5Q9Y5G8 931 aa18.83■□□□□ 0.6
GPC1-203ENST00000425056 MYH10P35580 1976 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 MYOFQ9NZM1 2061 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 FAM92AA1XBS5 289 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 K7EQS6 105 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 CLSTN1O94985 981 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 ZNF806P0C7X5 589 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 MBL2P11226 248 aaPredicted RBP18.82■□□□□ 0.6
GPC1-203ENST00000425056 P4HA1P13674 534 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 EIF2DP41214 584 aaKnown RBP18.82■□□□□ 0.6
GPC1-203ENST00000425056 TUBP50607 506 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 DHCR24Q15392 516 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 PLK5Q496M5 336 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 SNX30Q5VWJ9 437 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms