RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 MAGEA10P43363 369 aaPredicted RBP11.5□□□□□ -0.57
TNC-203ENST00000423613 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
TNC-203ENST00000423613 PTK7Q13308 1070 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 EPHA7Q15375 998 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 TAB1Q15750 504 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 CCNI2Q6ZMN8 369 aaPredicted RBP11.5□□□□□ -0.57
TNC-203ENST00000423613 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 HIST1H2AHQ96KK5 128 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 HIST1H2AJQ99878 128 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 H2AFJQ9BTM1 129 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 ADGRL3Q9HAR2 1447 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 HEY2Q9UBP5 337 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 E9PBE3 544 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 CNOT3O75175 753 aaKnown RBP11.5□□□□□ -0.57
TNC-203ENST00000423613 ARPC4P59998 168 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.57
TNC-203ENST00000423613 DNAJC3Q13217 504 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 PRR23CQ6ZRP0 262 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 CENPLQ8N0S6 344 aaPredicted RBP11.5□□□□□ -0.57
TNC-203ENST00000423613 ZFRQ96KR1 1074 aaKnown RBP11.5□□□□□ -0.57
TNC-203ENST00000423613 CHP1Q99653 195 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 ISCA1Q9BUE6 129 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 CCL15-CCL14A0A0B4J2E2 113 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 FAM205CA6NFA0 338 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 PDXKO00764 312 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 POU1F1P28069 291 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 AP1S2P56377 157 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 TAP1Q03518 808 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 CCL15Q16663 113 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 LRRC8DQ7L1W4 858 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 BHMTQ93088 406 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 ECSITQ9BQ95 431 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 MKNK1Q9BUB5 465 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 BCL2L14Q9BZR8 327 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 MFSD1Q9H3U5 465 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 FBXL21Q9UKT6 434 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 PNPLA7Q6ZV29 1317 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 TLR2O60603 784 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 RAD23AP54725 363 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 RALGDSQ12967 914 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 PRAMEF18Q5VWM3 479 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 PID1Q7Z2X4 250 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 DCLRE1BQ9H816 532 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 SLC25A13Q9UJS0 675 aa11.5□□□□□ -0.57
TNC-203ENST00000423613 SSNA1O43805 119 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 DUOXA2Q1HG44 320 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
TNC-203ENST00000423613 RNF149Q8NC42 400 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 C3orf20Q8ND61 904 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 FAM84BQ96KN1 310 aaPredicted RBP11.49□□□□□ -0.57
TNC-203ENST00000423613 AXIN2Q9Y2T1 843 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SH3GLB1Q9Y371 365 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 TBC1D12O60347 775 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 CASP4P49662 377 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 RUNDC3AQ59EK9 446 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 NEK5Q6P3R8 708 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 TMEM110Q86TL2 294 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SNX31Q8N9S9 440 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SPATA16Q9BXB7 569 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 PSMD11O00231 422 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SLC16A3O15427 465 aaKnown RBP11.49□□□□□ -0.57
TNC-203ENST00000423613 SCGNO76038 276 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 YY1P25490 414 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 NME5P56597 212 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 REXO1L1PQ8IX06 675 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 TTC39CQ8N584 583 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 ATL2Q8NHH9 583 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 TRIM9Q9C026 710 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 METTL5Q9NRN9 209 aaKnown RBP11.49□□□□□ -0.57
TNC-203ENST00000423613 A0A1B0GTH6 734 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SMIM31A0A1B0GVY4 71 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 ITGA4P13612 1032 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 AP3M2P53677 418 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 NCALDP61601 193 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SPANXN2Q5MJ10 180 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 RNF180Q86T96 592 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 PRUNE1Q86TP1 453 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SLC30A5Q8TAD4 765 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SLC35G2Q8TBE7 412 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 PCDHA10Q9Y5I2 948 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 MLNP12872 115 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 ATP13A5Q4VNC0 1218 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 SGO1Q5FBB7 561 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 LDHDQ86WU2 507 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 HMG20AQ9NP66 347 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 ABCB10Q9NRK6 738 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 COPG2Q9UBF2 871 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 XPO7Q9UIA9 1087 aaKnown RBP11.49□□□□□ -0.57
TNC-203ENST00000423613 C15orf41Q9Y2V0 281 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 PLEKHG2Q9H7P9 1386 aa11.49□□□□□ -0.57
TNC-203ENST00000423613 KCNN4O15554 427 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 SLC1A1P43005 524 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 SESN2P58004 480 aaPredicted RBP11.48□□□□□ -0.57
TNC-203ENST00000423613 TPI1P60174 286 aa11.48□□□□□ -0.57
TNC-203ENST00000423613 RBBP4Q09028 425 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms