RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 LRRC8AQ8IWT6 810 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 C12orf76Q8N812 135 aaPredicted RBP16.57■□□□□ 0.24
DDX55-203ENST00000421670 SCAMP5Q8TAC9 235 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 HDAC7Q8WUI4 952 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 CASP10Q92851 521 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 SPATA17Q96L03 361 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 PPP1R9BQ96SB3 815 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 PNPLA8Q9NP80 782 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 CLDND1Q9NY35 253 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 DPP7Q9UHL4 492 aa16.57■□□□□ 0.24
DDX55-203ENST00000421670 E5RJQ4 531 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 AKR1B10O60218 316 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 TBX10O75333 385 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 GABBR2O75899 941 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 LCP1P13796 627 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 PLD1Q13393 1074 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 VEPH1Q14D04 833 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 SLC18A3Q16572 532 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 ELMSAN1Q6PJG2 1045 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 DENND5BQ6ZUT9 1274 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 TMTC1Q8IUR5 882 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 PPP1R13BQ96KQ4 1090 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 APOL5Q9BWW9 433 aa16.56■□□□□ 0.24
DDX55-203ENST00000421670 MAGED2Q9UNF1 606 aaPredicted RBP16.56■□□□□ 0.24
DDX55-203ENST00000421670 SLC38A8A6NNN8 435 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 SRGAP2BP0DMP2 458 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 NSFP46459 744 aaKnown RBP16.55■□□□□ 0.24
DDX55-203ENST00000421670 DLX2Q07687 328 aaPredicted RBP16.55■□□□□ 0.24
DDX55-203ENST00000421670 ADAM15Q13444 863 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 RAB41Q5JT25 222 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 CYP4A22Q5TCH4 519 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 TMC5Q6UXY8 1006 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 RAD9BQ6WBX8 426 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 NUP93Q8N1F7 819 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 PSMG2Q969U7 264 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 NOX5Q96PH1 765 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 C11orf70Q9BRQ4 267 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 SLC4A5Q9BY07 1137 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 SYNCQ9H7C4 482 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 SFXN1Q9H9B4 322 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 LRRC4Q9HBW1 653 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 DZANK1Q9NVP4 752 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 ZDHHC7Q9NXF8 308 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 DENND4AQ7Z401 1863 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 CCDC195A0A1B0GUA6 201 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 ZNF263O14978 683 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 ERBB2P04626 1255 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 HOXA9P31269 272 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 TKTL1P51854 596 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 CCZ1BP86790 482 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 CCZ1P86791 482 aaPredicted RBP16.55■□□□□ 0.24
DDX55-203ENST00000421670 CTC1Q2NKJ3 1217 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 RARS2Q5T160 578 aaKnown RBP16.55■□□□□ 0.24
DDX55-203ENST00000421670 ALKBH5Q6P6C2 394 aaKnown RBP16.55■□□□□ 0.24
DDX55-203ENST00000421670 TMEM184AQ6ZMB5 413 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 MMS22LQ6ZRQ5 1243 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 RTL10Q7L3V2 364 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 ERICH1Q86X53 443 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 SIX6OS1Q8N1H7 587 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 CLEC4CQ8WTT0 213 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 STK32AQ8WU08 396 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 PPM1EQ8WY54 764 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 KCTD13Q8WZ19 329 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 ZNF707Q96C28 371 aaPredicted RBP16.55■□□□□ 0.24
DDX55-203ENST00000421670 HSFY1Q96LI6 401 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 ULBP1Q9BZM6 244 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 UBXN6Q9BZV1 441 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 MIS12Q9H081 205 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 CLEC1BQ9P126 229 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 CDH22Q9UJ99 828 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 NENFQ9UMX5 172 aa16.55■□□□□ 0.24
DDX55-203ENST00000421670 HNRNPA1P09651 372 aaKnown RBP eCLIP16.54■□□□□ 0.24
DDX55-203ENST00000421670 USP17L7P0C7H9 530 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 CSH1P0DML2 217 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 CSH2P0DML3 217 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 HMGA1P17096 107 aaKnown RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 MMP8P22894 467 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 RPL34P49207 117 aaKnown RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 TAF12Q16514 161 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 CCDC122Q5T0U0 273 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 ACAD10Q6JQN1 1059 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 ANKRD54Q6NXT1 300 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 MON1BQ7L1V2 547 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 DNAJB7Q7Z6W7 309 aaPredicted RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 CCDC170Q8IYT3 715 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 ELMOD1Q8N336 334 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 CCDC112Q8NEF3 446 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 NDRG1Q92597 394 aaKnown RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 PIWIL1Q96J94 861 aaKnown RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 ZNF830Q96NB3 372 aaPredicted RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 PRKD2Q9BZL6 878 aa16.54■□□□□ 0.24
DDX55-203ENST00000421670 ZNF334Q9HCZ1 680 aaPredicted RBP16.54■□□□□ 0.24
DDX55-203ENST00000421670 PAPSS1O43252 624 aaPredicted RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 ATMINO43313 823 aaPredicted RBP16.53■□□□□ 0.24
DDX55-203ENST00000421670 XYLBO75191 536 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms