RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TMEM30AQ9NV96 361 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 DMAC2Q9NW81 257 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 SERTAD1Q9UHV2 236 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 NUP205Q92621 2012 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.47■□□□□ 0.55
MSH6-203ENST00000420813 SLC30A4O14863 429 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 OAS1P00973 400 aaKnown RBP18.47■□□□□ 0.55
MSH6-203ENST00000420813 MYL1P05976 194 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 CASP4P49662 377 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 CACNA2D1P54289 1103 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 TAF10Q12962 218 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 STK4Q13043 487 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 BIRC3Q13489 604 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 ZNF699Q32M78 642 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 ZNF667Q5HYK9 610 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 GRAMD1CQ8IYS0 662 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 KIAA0895Q8NCT3 520 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 PDZD8Q8NEN9 1154 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 RPLP0P6Q8NHW5 317 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 OVCA2Q8WZ82 227 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 PAGE5Q96GU1 130 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 B3GNT5Q9BYG0 378 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 RNF38Q9H0F5 515 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 LINC00597Q9H2U6 94 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 EXOC1Q9NV70 894 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 USP25Q9UHP3 1055 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 ATP8B3O60423 1300 aa18.47■□□□□ 0.55
MSH6-203ENST00000420813 MYO18AQ92614 2054 aaKnown RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 LRRIQ3A6PVS8 624 aaPredicted RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 SLC9A3R1O14745 358 aaPredicted RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 RTN3O95197 1032 aaPredicted RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 EPN2O95208 641 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 C4BPAP04003 597 aaKnown RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 CCDC192P0DO97 292 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 RAP1GAPP47736 663 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 PXNP49023 591 aaPredicted RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 NCOA4Q13772 614 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 DDX42Q86XP3 938 aaKnown RBP eCLIP18.46■□□□□ 0.55
MSH6-203ENST00000420813 NUP93Q8N1F7 819 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 ZC3H10Q96K80 434 aaKnown RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 TNIP3Q96KP6 325 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 KCTD10Q9H3F6 313 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 SMYD3Q9H7B4 428 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 CPQQ9Y646 472 aa18.46■□□□□ 0.55
MSH6-203ENST00000420813 CNOT1A5YKK6 2376 aaKnown RBP18.46■□□□□ 0.55
MSH6-203ENST00000420813 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.45■□□□□ 0.54
MSH6-203ENST00000420813 CLDN5O00501 218 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 PDXKO00764 312 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 AXIN1O15169 862 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 APBB3O95704 486 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 CMA1P23946 247 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 YWHAQP27348 245 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 OPRD1P41143 372 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 DMC1Q14565 340 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 KMT5BQ4FZB7 885 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 HHIPQ96QV1 700 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 EBF1Q9UH73 591 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 PCDHGA5Q9Y5G8 931 aa18.45■□□□□ 0.54
MSH6-203ENST00000420813 TPRP12270 2363 aaKnown RBP18.45■□□□□ 0.54
MSH6-203ENST00000420813 THADAQ6YHU6 1953 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 VNN1O95497 513 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 ABL1P00519 1130 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 CYP17A1P05093 508 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 P4HA1P13674 534 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 PFKFB1P16118 471 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 CDH8P55286 799 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 GAB4Q2WGN9 574 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 ZACNQ401N2 412 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 FILIP1Q7Z7B0 1213 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 FAM35AQ86V20 835 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 KBTBD6Q86V97 674 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 ADGRG2Q8IZP9 1017 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 TMC2Q8TDI7 906 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 SMARCD1Q96GM5 515 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 DMAP1Q9NPF5 467 aaPredicted RBP18.44■□□□□ 0.54
MSH6-203ENST00000420813 HPSEQ9Y251 543 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 ABCA7Q8IZY2 2146 aa18.44■□□□□ 0.54
MSH6-203ENST00000420813 DCDC2BA2VCK2 349 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 IKBKBO14920 756 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 CLSTN1O94985 981 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 NR3C1P04150 777 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 RPN1P04843 607 aaKnown RBP18.43■□□□□ 0.54
MSH6-203ENST00000420813 ZNF806P0C7X5 589 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 MBL2P11226 248 aaPredicted RBP18.43■□□□□ 0.54
MSH6-203ENST00000420813 EIF2DP41214 584 aaKnown RBP18.43■□□□□ 0.54
MSH6-203ENST00000420813 LIMK1P53667 647 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 IFRD2Q12894 506 aaPredicted RBP18.43■□□□□ 0.54
MSH6-203ENST00000420813 DHCR24Q15392 516 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 SGSM1Q2NKQ1 1148 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 SNX30Q5VWJ9 437 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 PAQR9Q6ZVX9 377 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 USP33Q8TEY7 942 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 TAF4BQ92750 862 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 FBXO32Q969P5 355 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 ARRDC1-AS1Q9H2J1 176 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 POLR3BQ9NW08 1133 aaPredicted RBP18.43■□□□□ 0.54
MSH6-203ENST00000420813 COMMD8Q9NX08 183 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 SMPD4Q9NXE4 827 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 IL37Q9NZH6 218 aa18.43■□□□□ 0.54
MSH6-203ENST00000420813 TBC1D14Q9P2M4 693 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms