RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 CCDC150Q8NCX0 1101 aa22.67■■□□□ 1.22
PTPN4-202ENST00000420482 PLEKHO2Q8TD55 490 aa22.67■■□□□ 1.22
PTPN4-202ENST00000420482 SMARCD1Q96GM5 515 aa22.67■■□□□ 1.22
PTPN4-202ENST00000420482 B3GNT5Q9BYG0 378 aa22.67■■□□□ 1.22
PTPN4-202ENST00000420482 WNT6Q9Y6F9 365 aa22.67■■□□□ 1.22
PTPN4-202ENST00000420482 PTPRDP23468 1912 aa22.67■■□□□ 1.22
PTPN4-202ENST00000420482 GREB1Q4ZG55 1949 aa22.67■■□□□ 1.22
PTPN4-202ENST00000420482 OTOL1A6NHN0 477 aaPredicted RBP22.66■■□□□ 1.22
PTPN4-202ENST00000420482 K7ESF4 209 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 NR2F2P24468 414 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 PIK3CAP42336 1068 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 GALK1P51570 392 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 VAMP7P51809 220 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 CDH8P55286 799 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 SLC7A9P82251 487 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 LMNB2Q03252 620 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 TAF10Q12962 218 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 BECN1Q14457 450 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 NFIL3Q16649 462 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 EML3Q32P44 896 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 WDR44Q5JSH3 913 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 HEATR6Q6AI08 1181 aaKnown RBP22.66■■□□□ 1.22
PTPN4-202ENST00000420482 FSTL4Q6MZW2 842 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 UNC93AQ86WB7 457 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 CD101Q93033 1021 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 DMAP1Q9NPF5 467 aaPredicted RBP22.66■■□□□ 1.22
PTPN4-202ENST00000420482 COMMD8Q9NX08 183 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 NME7Q9Y5B8 376 aa22.66■■□□□ 1.22
PTPN4-202ENST00000420482 PRR5-ARHGAP8B1AHC4 643 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 DLG4P78352 724 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 ARHGAP8P85298 464 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 DPYDQ12882 1025 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 CEP68Q76N32 757 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 SV2AQ7L0J3 742 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.65■■□□□ 1.22
PTPN4-202ENST00000420482 WDR5BQ86VZ2 330 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 GUF1Q8N442 669 aaKnown RBP22.65■■□□□ 1.22
PTPN4-202ENST00000420482 RIN3Q8TB24 985 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 FBXO32Q969P5 355 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 USP18Q9UMW8 372 aa22.65■■□□□ 1.22
PTPN4-202ENST00000420482 RALGAPA1Q6GYQ0 2036 aa22.64■■□□□ 1.22
PTPN4-202ENST00000420482 CCDC163A0A0D9SF12 145 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 GOLGA6L4A6NEF3 574 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 LEFTY2O00292 366 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 CLDN5O00501 218 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 LRP3O75074 770 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 RNF40O75150 1001 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 ZNF202O95125 648 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 VNN1O95497 513 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 RETP07949 1114 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 PSMC2P35998 433 aaKnown RBP22.64■■□□□ 1.21
PTPN4-202ENST00000420482 RAP1GAPP47736 663 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 ENPEPQ07075 957 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 FAM35AQ86V20 835 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 CAMKK1Q8N5S9 505 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 ACDQ96AP0 544 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 ANAPC1Q9H1A4 1944 aa22.64■■□□□ 1.21
PTPN4-202ENST00000420482 HELZP42694 1942 aaKnown RBP22.63■■□□□ 1.21
PTPN4-202ENST00000420482 OLFM2O95897 454 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 ASS1P00966 412 aaKnown RBP22.63■■□□□ 1.21
PTPN4-202ENST00000420482 EGFP01133 1207 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 MBL2P11226 248 aaPredicted RBP22.63■■□□□ 1.21
PTPN4-202ENST00000420482 CACNA2D1P54289 1103 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 LPAL2Q16609 132 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 RSPO4Q2I0M5 234 aaPredicted RBP22.63■■□□□ 1.21
PTPN4-202ENST00000420482 ACOT1Q86TX2 421 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 FAM186BQ8IYM0 893 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 CHFRQ96EP1 664 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 FBXO44Q9H4M3 255 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 RMND1Q9NWS8 449 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 TBC1D14Q9P2M4 693 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 MAPK8IP1Q9UQF2 711 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 CPQQ9Y646 472 aa22.63■■□□□ 1.21
PTPN4-202ENST00000420482 SPTBN2O15020 2390 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 FOXD2O60548 495 aaPredicted RBP22.62■■□□□ 1.21
PTPN4-202ENST00000420482 AP1G2O75843 785 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 OAS1P00973 400 aaKnown RBP22.62■■□□□ 1.21
PTPN4-202ENST00000420482 HLA-DRAP01903 254 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 PRR29P0C7W0 189 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 NDST1P52848 882 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 ADAM9Q13443 819 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 CRYBG2Q8N1P7 616 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 CHAMP1Q96JM3 812 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 KCNK16Q96T55 309 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 KRT82Q9NSB4 513 aa22.62■■□□□ 1.21
PTPN4-202ENST00000420482 HRO43593 1189 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 TUBP50607 506 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 SLC5A3P53794 718 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 DMWDQ09019 674 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 HECTD3Q5T447 861 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 FILIP1Q7Z7B0 1213 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 NACA2Q9H009 215 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 RNF38Q9H0F5 515 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 SDCBP2Q9H190 292 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 LINC00597Q9H2U6 94 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 CYP3A43Q9HB55 503 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 SMPD4Q9NXE4 827 aa22.61■■□□□ 1.21
PTPN4-202ENST00000420482 STX10O60499 249 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 AKAP3O75969 853 aa22.6■■□□□ 1.21
PTPN4-202ENST00000420482 EDRF1Q3B7T1 1238 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms