RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SLC28A3Q9HAS3 691 aa15.01□□□□□ -0.01
SHMT1P1-201ENST00000419974 KRT82Q9NSB4 513 aa15.01□□□□□ -0.01
SHMT1P1-201ENST00000419974 TMLHEQ9NVH6 421 aa15.01□□□□□ -0.01
SHMT1P1-201ENST00000419974 IL37Q9NZH6 218 aa15.01□□□□□ -0.01
SHMT1P1-201ENST00000419974 IP6K2Q9UHH9 426 aa15.01□□□□□ -0.01
SHMT1P1-201ENST00000419974 PCDHB5Q9Y5E4 795 aa15.01□□□□□ -0.01
SHMT1P1-201ENST00000419974 UNC80Q8N2C7 3258 aa15.01□□□□□ -0.01
SHMT1P1-201ENST00000419974 EYSQ5T1H1 3165 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 CHD9Q3L8U1 2897 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 MIF4GDA9UHW6 222 aaKnown RBP15□□□□□ -0.01
SHMT1P1-201ENST00000419974 TULP2O00295 520 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 CLDN5O00501 218 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 TNFRSF10BO14763 440 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 TRIM66O15016 1216 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 PAPSS1O43252 624 aaPredicted RBP15□□□□□ -0.01
SHMT1P1-201ENST00000419974 BEST1O76090 585 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 FGF18O76093 207 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 PROSCO94903 275 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 ABLIM3O94929 683 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 CTSAP10619 480 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 SSTR3P32745 418 aaPredicted RBP15□□□□□ -0.01
SHMT1P1-201ENST00000419974 GLUD2P49448 558 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 NAP1L1P55209 391 aaKnown RBP15□□□□□ -0.01
SHMT1P1-201ENST00000419974 AMPD2Q01433 879 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 PIGHQ14442 188 aaPredicted RBP15□□□□□ -0.01
SHMT1P1-201ENST00000419974 EFHC1Q5JVL4 640 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 CEP57Q86XR8 500 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 FBXO22Q8NEZ5 403 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 KHSRPQ92945 711 aaKnown RBP eCLIP15□□□□□ -0.01
SHMT1P1-201ENST00000419974 CD101Q93033 1021 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 SPATA17Q96L03 361 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 TMEM209Q96SK2 561 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 MED10Q9BTT4 135 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 SELENOOQ9BVL4 669 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 ZBP1Q9H171 429 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 SYNCQ9H7C4 482 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 L2HGDHQ9H9P8 463 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 ALG6Q9Y672 507 aa15□□□□□ -0.01
SHMT1P1-201ENST00000419974 FAM92AA1XBS5 289 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 DPYSL4O14531 572 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 FOSL2P15408 326 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 TCP1P17987 556 aaKnown RBP14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 MAP3K7CLP57077 242 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 ADCY1Q08828 1119 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 RAB33AQ14088 237 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 PSMD5Q16401 504 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 SLC39A12Q504Y0 691 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 LRRC38Q5VT99 294 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 FAM117BQ6P1L5 589 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 RSPO2Q6UXX9 243 aaPredicted RBP14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 RTL10Q7L3V2 364 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 DAAM2Q86T65 1068 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 MAFAQ8NHW3 353 aaPredicted RBP14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 ZNF461Q8TAF7 563 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 CLSTN3Q9BQT9 956 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 TRIM62Q9BVG3 475 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 TLR10Q9BXR5 811 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 TMEM30AQ9NV96 361 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 RNF14Q9UBS8 474 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 AFF4Q9UHB7 1163 aaKnown RBP14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 ANAPC7Q9UJX3 599 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 SNX12Q9UMY4 172 aa14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 YBX2Q9Y2T7 364 aaKnown RBP14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 COL4A4P53420 1690 aaPredicted RBP14.99□□□□□ -0.01
SHMT1P1-201ENST00000419974 VWA8A3KMH1 1905 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 MTMR11A4FU01 709 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 C2CD4BA6NLJ0 364 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 ATMINO43313 823 aaPredicted RBP14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 URODP06132 367 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 BDNFP23560 247 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 TUFMP49411 452 aaKnown RBP14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 ZNF143P52747 638 aaPredicted RBP14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 MRPS5P82675 430 aaKnown RBP14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 CCDC142Q17RM4 750 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 KIAA1841Q6NSI8 718 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 FAM183BPQ6ZVS7 135 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 PEX26Q7Z412 305 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 SCUBE3Q8IX30 993 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 VPS52Q8N1B4 723 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 RIN2Q8WYP3 895 aaPredicted RBP14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 NT5C3BQ969T7 300 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 KCNK16Q96T55 309 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 C11orf84Q9BUA3 381 aaPredicted RBP14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 ST7Q9NRC1 585 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 MRPL17Q9NRX2 175 aaKnown RBP14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 TJP2Q9UDY2 1190 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 AMFRQ9UKV5 643 aa14.98□□□□□ -0.01
SHMT1P1-201ENST00000419974 CCDC66A2RUB6 948 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 LINC01553A4QN01 128 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 HSF2BPO75031 334 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 HAPLN1P10915 354 aaPredicted RBP14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 ATF2P15336 505 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 CTNNA2P26232 953 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 RFC1P35251 1148 aaPredicted RBP14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 PCK1P35558 622 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 PTPN9P43378 593 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 CACNA2D1P54289 1103 aa14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 RPL7AP62424 266 aaKnown RBP14.97□□□□□ -0.01
SHMT1P1-201ENST00000419974 ROR1Q01973 937 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms