RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TRIP13Q15645 432 aaPredicted RBP15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 HIF1AQ16665 826 aa15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PPP1R26Q5T8A7 1209 aaPredicted RBP15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TXNRD3NBQ6F5E7 133 aa15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 EPS8L3Q8TE67 593 aaKnown RBP15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 DNAJB3Q8WWF6 145 aa15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RXFP2Q8WXD0 754 aa15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ZMAT2Q96NC0 199 aaKnown RBP15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 NXF3Q9H4D5 531 aaKnown RBP15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 GTF2IRD1Q9UHL9 959 aa15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 GINS2Q9Y248 185 aa15.22■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SMIM28A0A1B0GU29 152 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TULP2O00295 520 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ALOX15BO15296 676 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 HUS1O60921 280 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PFKMP08237 780 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ZNF157P51786 506 aaPredicted RBP15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PURAQ00577 322 aaKnown RBP15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 LLGL1Q15334 1064 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 CCDC142Q17RM4 750 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SOWAHAQ2M3V2 549 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 EFHC1Q5JVL4 640 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TADA2BQ86TJ2 420 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RFX6Q8HWS3 928 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 EMC1Q8N766 993 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ATP11CQ8NB49 1132 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 OR6B3Q8NGW1 331 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 PRCCQ92733 491 aaPredicted RBP15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 ARHGEF2Q92974 986 aaKnown RBP15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 FAF2Q96CS3 445 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 RTP4Q96DX8 246 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SGSM3Q96HU1 749 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 CALN1Q9BXU9 219 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 EIF2AQ9BY44 585 aaKnown RBP15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SNX25Q9H3E2 840 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 SPC25Q9HBM1 224 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 TUBGCP4Q9UGJ1 667 aa15.21■□□□□ 0.03
HLA-DPA1-242ENST00000419277 E7ESA3 106 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 IGF2BP3O00425 579 aaKnown RBP eCLIP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CHN1P15882 459 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 NR2C2P49116 596 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 VPS41P49754 854 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CDH6P55285 790 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ROR1Q01973 937 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 KYNUQ16719 465 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SMTNL2Q2TAL5 461 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ARHGEF18Q6ZSZ5 1173 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 STRADAQ7RTN6 431 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TAX1BP1Q86VP1 789 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PDIK1LQ8N165 341 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ANKS4BQ8N8V4 417 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SELENOSQ9BQE4 189 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MRPL45Q9BRJ2 306 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MTG1Q9BT17 334 aaPredicted RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TMEM121Q9BTD3 319 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DDX23Q9BUQ8 820 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PPANQ9NQ55 473 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 EURLQ9NYK6 297 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PAK5Q9P286 719 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TJP2Q9UDY2 1190 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TRIP12Q14669 1992 aaPredicted RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 EXOC1LA0A1B0GW35 172 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DCDC2CA8MYV0 355 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MYO1CO00159 1063 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TNPO2O14787 897 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 XPO1O14980 1071 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 MYL3P08590 195 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RBP3P10745 1247 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PECAM1P16284 738 aaPredicted RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 GNL1P36915 607 aaPredicted RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 AIF1P55008 147 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 EIF3EP60228 445 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 XRCC4Q13426 336 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DPYSL3Q14195 570 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 KRT81Q14533 505 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 DPYSL2Q16555 572 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 KLHL38Q2WGJ6 581 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ZC3H12AQ5D1E8 599 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CST9Q5W186 159 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SLC9A4Q6AI14 798 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RGMBQ6NW40 437 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 BZW1Q7L1Q6 419 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ACOT1Q86TX2 421 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TMEM86AQ8N2M4 240 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 UBA3Q8TBC4 463 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CENPIQ92674 756 aaPredicted RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 RNF157Q96PX1 679 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 PLCD4Q9BRC7 762 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SSU72Q9NP77 194 aaKnown RBP15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 IPPQ9Y573 584 aa15.2■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CHADO15335 359 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 TREHO43280 583 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 IFNB1P01574 187 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 SLC10A3P09131 477 aa15.19■□□□□ 0.02
HLA-DPA1-242ENST00000419277 CTCFP49711 727 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms