RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TCERG1LQ5VWI1 586 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 TRIM68Q6AZZ1 485 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 ZC3H14Q6PJT7 736 aaKnown RBP17.47■□□□□ 0.39
LINC00404-201ENST00000418660 TXNDC11Q6PKC3 985 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 ASCL5Q7RTU5 278 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 C12orf29Q8N999 325 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 PDZD8Q8NEN9 1154 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 SH3RF2Q8TEC5 729 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 OSCP1Q8WVF1 389 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 OVCA2Q8WZ82 227 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 SEMA4DQ92854 862 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 TWNKQ96RR1 684 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 DNAI2Q9GZS0 605 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 SEMA4AQ9H3S1 761 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 EBF3Q9H4W6 596 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 CSNK1G1Q9HCP0 422 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 KRT82Q9NSB4 513 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 CHMP5Q9NZZ3 219 aa17.47■□□□□ 0.39
LINC00404-201ENST00000418660 KIF26AQ9ULI4 1882 aaPredicted RBP17.47■□□□□ 0.39
LINC00404-201ENST00000418660 CILPO75339 1184 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 ABL1P00519 1130 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 ARSAP15289 507 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 CD44P16070 742 aaKnown RBP17.46■□□□□ 0.39
LINC00404-201ENST00000418660 SLC5A3P53794 718 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 SLC7A9P82251 487 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 IFRD2Q12894 506 aaPredicted RBP17.46■□□□□ 0.39
LINC00404-201ENST00000418660 MORC3Q14149 939 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 PON2Q15165 354 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 DCAF17Q5H9S7 520 aaPredicted RBP17.46■□□□□ 0.39
LINC00404-201ENST00000418660 DGKKQ5KSL6 1271 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 TTC39CQ8N584 583 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 WHAMMQ8TF30 809 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 FBXO32Q969P5 355 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 CYFIP2Q96F07 1278 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 HNRNPABQ99729 332 aaKnown RBP17.46■□□□□ 0.39
LINC00404-201ENST00000418660 SMOQ99835 787 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 PRMT8Q9NR22 394 aaPredicted RBP17.46■□□□□ 0.39
LINC00404-201ENST00000418660 FAM49BQ9NUQ9 324 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 DUS2Q9NX74 493 aaKnown RBP17.46■□□□□ 0.39
LINC00404-201ENST00000418660 ARMCX3Q9UH62 379 aaPredicted RBP17.46■□□□□ 0.39
LINC00404-201ENST00000418660 COQ4Q9Y3A0 265 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 R4GN57 208 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 PATJQ8NI35 1801 aa17.46■□□□□ 0.39
LINC00404-201ENST00000418660 FAM92AA1XBS5 289 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 OTOL1A6NHN0 477 aaPredicted RBP17.45■□□□□ 0.38
LINC00404-201ENST00000418660 BEST1O76090 585 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 OLFM2O95897 454 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 OAS1P00973 400 aaKnown RBP17.45■□□□□ 0.38
LINC00404-201ENST00000418660 CD58P19256 250 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 BMP6P22004 513 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 IFNAR2P48551 515 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 MAP3K7CLP57077 242 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 AMPD2Q01433 879 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 CBWD6Q4V339 395 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 WDR44Q5JSH3 913 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 CBWD3Q5JTY5 395 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 CBWD5Q5RIA9 395 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 FOXR2Q6PJQ5 311 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 FILIP1Q7Z7B0 1213 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 CPA6Q8N4T0 437 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 TTC16Q8NEE8 873 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 ZMIZ2Q8NF64 920 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 SCAMP5Q8TAC9 235 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 CEP63Q96MT8 703 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 RNF38Q9H0F5 515 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 FAM124BQ9H5Z6 455 aaPredicted RBP17.45■□□□□ 0.38
LINC00404-201ENST00000418660 METTL14Q9HCE5 456 aaKnown RBP17.45■□□□□ 0.38
LINC00404-201ENST00000418660 WNT6Q9Y6F9 365 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 ANAPC1Q9H1A4 1944 aa17.45■□□□□ 0.38
LINC00404-201ENST00000418660 PPP1R3GB7ZBB8 358 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 LEFTY2O00292 366 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 FAM200BP0CF97 657 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 ADORA2BP29275 332 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 CCR3P51677 355 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 UBE2HP62256 183 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 ZXDBP98169 803 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 SNX30Q5VWJ9 437 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 SYNPOQ8N3V7 929 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 KIAA1958Q8N8K9 716 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 NELL1Q92832 810 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 ATP2A3Q93084 1043 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 SLC35C1Q96A29 364 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 DUSP9Q99956 384 aaKnown RBP17.44■□□□□ 0.38
LINC00404-201ENST00000418660 ECT2Q9H8V3 914 aa17.44■□□□□ 0.38
LINC00404-201ENST00000418660 RBM12Q9NTZ6 932 aaKnown RBP17.44■□□□□ 0.38
LINC00404-201ENST00000418660 CHORDC1Q9UHD1 332 aaPredicted RBP17.44■□□□□ 0.38
LINC00404-201ENST00000418660 F5P12259 2224 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 ZNF638Q14966 1978 aaKnown RBP17.43■□□□□ 0.38
LINC00404-201ENST00000418660 BICDL2A1A5D9 508 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 BIN1O00499 593 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 TRDMT1O14717 391 aaKnown RBP17.43■□□□□ 0.38
LINC00404-201ENST00000418660 CCINQ13939 588 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 GAS6Q14393 721 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 PPP2R5DQ14738 602 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 EML3Q32P44 896 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 TMEM196Q5HYL7 178 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 HECTD3Q5T447 861 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 KLHL10Q6JEL2 608 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 TTI2Q6NXR4 508 aa17.43■□□□□ 0.38
LINC00404-201ENST00000418660 TSSK4Q6SA08 328 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms