RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 RNF38Q9H0F5 515 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 FAM124BQ9H5Z6 455 aaPredicted RBP21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 KIF9Q9HAQ2 790 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 DMAP1Q9NPF5 467 aaPredicted RBP21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 GTSE1Q9NYZ3 720 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 AVPR1AP37288 418 aa21.86■■□□□ 1.09
PKNOX1-202ENST00000418336 SOX9P48436 509 aa21.86■■□□□ 1.09
PKNOX1-202ENST00000418336 PPP1R26Q5T8A7 1209 aaPredicted RBP21.86■■□□□ 1.09
PKNOX1-202ENST00000418336 TXNDC11Q6PKC3 985 aa21.86■■□□□ 1.09
PKNOX1-202ENST00000418336 GPT2Q8TD30 523 aa21.86■■□□□ 1.09
PKNOX1-202ENST00000418336 SRRTQ9BXP5 876 aaKnown RBP21.86■■□□□ 1.09
PKNOX1-202ENST00000418336 PIAS3Q9Y6X2 628 aa21.86■■□□□ 1.09
PKNOX1-202ENST00000418336 FAM170BA6NMN3 283 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 CLSTN1O94985 981 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 PFKLP17858 780 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 ACO1P21399 889 aaKnown RBP21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 CUL2Q13617 745 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 ZNF852Q6ZMS4 543 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 CYFIP2Q96F07 1278 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 IPO9Q96P70 1041 aaKnown RBP21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 MED10Q9BTT4 135 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 TRPC7Q9HCX4 862 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 ARHGAP26Q9UNA1 814 aa21.85■■□□□ 1.09
PKNOX1-202ENST00000418336 CACNA1IQ9P0X4 2223 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 ATP8B3O60423 1300 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 TRAV19A0A0A6YYK7 116 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 H0Y858 1186 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 DPYSL4O14531 572 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 P4HA2O15460 535 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 RTN3O95197 1032 aaPredicted RBP21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 YWHAQP27348 245 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 ADORA2BP29275 332 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 PPP3CCP48454 512 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 MAP3K7CLP57077 242 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 CCDC40Q4G0X9 1142 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 ZNF394Q53GI3 561 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 TRIM68Q6AZZ1 485 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 OVCA2Q8WZ82 227 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 ZFRQ96KR1 1074 aaKnown RBP21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 GKN1Q9NS71 199 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 COMMD8Q9NX08 183 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 TRPM5Q9NZQ8 1165 aa21.84■■□□□ 1.09
PKNOX1-202ENST00000418336 STK25O00506 426 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 USP17L7P0C7H9 530 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 SLC7A9P82251 487 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 PLCB2Q00722 1185 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 KCNH2Q12809 1159 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 UBXN2BQ14CS0 331 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 DPCR1Q3MIW9 517 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 ARHGAP17Q68EM7 881 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 YAF2Q8IY57 180 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 CCDC150Q8NCX0 1101 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 KAT5Q92993 513 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 TMEM176AQ96HP8 235 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 EHD2Q9NZN4 543 aa21.83■■□□□ 1.09
PKNOX1-202ENST00000418336 GNA14O95837 355 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 FAM200BP0CF97 657 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 HDCP19113 662 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 CTHP32929 405 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 RPS9P46781 194 aaKnown RBP21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 ANGPT1Q15389 498 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 RBM43Q6ZSC3 357 aaKnown RBP21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 MLKLQ8NB16 471 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 TTC8Q8TAM2 541 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 SH3RF2Q8TEC5 729 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 FAM3CQ92520 227 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 DUSP16Q9BY84 665 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 PNPLA8Q9NP80 782 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 OSER1Q9NX31 292 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 GMIPQ9P107 970 aa21.82■■□□□ 1.08
PKNOX1-202ENST00000418336 MYO16Q9Y6X6 1858 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 PIEZO1Q92508 2521 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 MYH10P35580 1976 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 SPECC1L-ADORA2AF8WAN1 911 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 MAN2B1O00754 1011 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 CKMP06732 381 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 CHRNB1P11230 501 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 ARSAP15289 507 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 HOXD11P31277 338 aaPredicted RBP21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 IFRD2Q12894 506 aaPredicted RBP21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 LRMPQ12912 555 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 MTF1Q14872 753 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 TTC30AQ86WT1 665 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 ARHGEF19Q8IW93 802 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 TTC39CQ8N584 583 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 FBXO32Q969P5 355 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 MSANTD3Q96H12 275 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 NELL2Q99435 816 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 ZSWIM1Q9BR11 485 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 NUP62CLQ9H1M0 184 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 EBF3Q9H4W6 596 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 C8orf33Q9H7E9 229 aaPredicted RBP21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 FAM86C1Q9NVL1 165 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 CHORDC1Q9UHD1 332 aaPredicted RBP21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 USP3Q9Y6I4 520 aa21.81■■□□□ 1.08
PKNOX1-202ENST00000418336 RNF225M0QZC1 329 aaPredicted RBP21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 COCHO43405 550 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 TUBP50607 506 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 GAS6Q14393 721 aa21.8■■□□□ 1.08
PKNOX1-202ENST00000418336 EML3Q32P44 896 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms