RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 IFNB1P01574 187 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 CD48P09326 243 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 CCDC166P0CW27 439 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 PEX2P28328 305 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 HOXA10P31260 410 aaPredicted RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 L1CAMP32004 1257 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 NPTX2P47972 431 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 CLCN2P51788 898 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 EMP3P54852 163 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 AQP5P55064 265 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 ZNF200P98182 395 aaPredicted RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 UBAP2LQ14157 1087 aaKnown RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 BBS9Q3SYG4 887 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 ANGEL2Q5VTE6 544 aaKnown RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 CCDC174Q6PII3 467 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 PASD1Q8IV76 773 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 TRIM42Q8IWZ5 723 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 ALDH16A1Q8IZ83 802 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 UBR7Q8N806 425 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 RAB3IL1Q8TBN0 382 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 PIP4K2CQ8TBX8 421 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 ACTL9Q8TC94 416 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 GDPD5Q8WTR4 605 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 PYDC1Q8WXC3 89 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 BSNDQ8WZ55 320 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 NTPCRQ9BSD7 190 aaKnown RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 IDI2Q9BXS1 227 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 FRMD8P1Q9BZ68 369 aaPredicted RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 C1orf112Q9NSG2 853 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 GINM1Q9NU53 330 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 DDX56Q9NY93 547 aaKnown RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 CLIC5Q9NZA1 410 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 ARHGAP28Q9P2N2 729 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
VRK2-203ENST00000417641 PI4KBQ9UBF8 816 aa8.2□□□□□ -1.1
VRK2-203ENST00000417641 LRRC37AA6NMS7 1700 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 A0A0J9YVX5 310 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 DDX39AO00148 427 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 SORBS2O94875 1100 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 GDF11O95390 407 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 HLA-DRAP01903 254 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 YWHABP31946 246 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 ELK3P41970 407 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 QARSP47897 775 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 ZNF132P52740 706 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SLC25A3Q00325 362 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 OTUD4Q01804 1114 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 SULT2A1Q06520 285 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 IKQ13123 557 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 MAP7Q14244 749 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 UGCGQ16739 394 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 USP41Q3LFD5 358 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 TBC1D10BQ4KMP7 808 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 OGFRL1Q5TC84 451 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 MAP3K21Q5TCX8 1036 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 ATG16L1Q676U5 607 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SPOPLQ6IQ16 392 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 PPP1R2P3Q6NXS1 205 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 BBS12Q6ZW61 710 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 UNC45BQ8IWX7 931 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 HOMEZQ8IX15 550 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 GPD1LQ8N335 351 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SAMD3Q8N6K7 520 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 METTL25Q8N6Q8 603 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 ACSF2Q96CM8 615 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 NMD3Q96D46 503 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 NLRP4Q96MN2 994 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 ZNF778Q96MU6 729 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 ACAP3Q96P50 834 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 EBF4Q9BQW3 602 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SH2D3AQ9BRG2 576 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 KIFC3Q9BVG8 833 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SAE1Q9UBE0 346 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 XPO7Q9UIA9 1087 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 ZNF180Q9UJW8 692 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SYNPO2Q9UMS6 1093 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 CHMP2BQ9UQN3 213 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 TTLL3Q9Y4R7 772 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SF3B1O75533 1304 aaKnown RBP eCLIP8.19□□□□□ -1.12e-6■■■■■ 172.3
VRK2-203ENST00000417641 MEI4A8MW99 385 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 TRIM49D1C9J1S8 452 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 KBTBD13C9JR72 458 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 COPEO14579 308 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 HNRNPRO43390 633 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 ITGBL1O95965 494 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 GSRP00390 522 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 GARTP22102 1010 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 SSTR3P32745 418 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 CRKP46108 304 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 RPL5P46777 297 aaKnown RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 HSPA2P54652 639 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 CUL2Q13617 745 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 NCOA4Q13772 614 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 HIC1Q14526 733 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 CHI3L2Q15782 390 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 ABCB5Q2M3G0 1257 aa8.19□□□□□ -1.1
VRK2-203ENST00000417641 BRDTQ58F21 947 aaPredicted RBP8.19□□□□□ -1.1
VRK2-203ENST00000417641 RALGPS1Q5JS13 557 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms