RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 GPATCH2LQ9NWQ4 482 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 SAE1Q9UBE0 346 aaPredicted RBP11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 PCYOX1Q9UHG3 505 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 SQORQ9Y6N5 450 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 TTC3P53804 2025 aa11.2□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM187AA6NFU0 413 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 DDHD2O94830 711 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 ECEL1O95672 775 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 RPL21P46778 160 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 LHX1P48742 406 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 NDUFV1P49821 464 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CDK7P50613 346 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 PLTPP55058 493 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 RNASELQ05823 741 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 DUPD1Q68J44 220 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CD300LGQ6UXG3 332 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 KCTD6Q8NC69 237 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM172AQ8WUF8 416 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM149B1Q96BN6 582 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 PCED1BQ96HM7 432 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 KCNK16Q96T55 309 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 HNRNPABQ99729 332 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CALN1Q9BXU9 219 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 DUSP16Q9BY84 665 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 UBN1Q9NPG3 1134 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 DDX56Q9NY93 547 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 TRUB2O95900 331 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 KRT7P08729 469 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 ODC1P11926 461 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 NPR3P17342 541 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 SDC4P31431 198 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CDKN2BP42772 138 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 OR1G1P47890 313 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 FNTAP49354 379 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 GATMP50440 423 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 ATXN1P54253 815 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CACNA2D1P54289 1103 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CCL23P55773 120 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 BCAR1P56945 870 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 SLC8A3P57103 927 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 KRT17Q04695 432 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 GPNMBQ14956 572 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 TFDP3Q5H9I0 405 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CLEC20AQ6ZU45 233 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CTU1Q7Z7A3 348 aaKnown RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 TMEM86AQ8N2M4 240 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 C12orf50Q8NA57 414 aaPredicted RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 STK32AQ8WU08 396 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 MAIP1Q8WWC4 291 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 CAVIN3Q969G5 261 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 TMEM209Q96SK2 561 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 PPP1R12CQ9BZL4 782 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 PAK6Q9NQU5 681 aaPredicted RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM114A2Q9NRY5 505 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 TMEM30AQ9NV96 361 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 DNAJB4Q9UDY4 337 aa11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 PRG3Q9Y2Y8 225 aaPredicted RBP11.19□□□□□ -0.62
SMPD4P1-201ENST00000416717 hCG_1818297A0A087WSY0 165 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 SYNJ2BP-COX16A0A087WUM0 186 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 BHMG1C9JSJ3 638 aaPredicted RBP11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 XPO1O14980 1071 aaKnown RBP11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 AP1G2O75843 785 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 TJP3O95049 919 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM200BP0CF97 657 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 KDELR1P24390 212 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 GGCXP38435 758 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 SNX16P57768 344 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 TCTN1Q2MV58 587 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 NOMO2Q5JPE7 1267 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 POLNQ7Z5Q5 900 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 FAM35AQ86V20 835 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 ADAM33Q9BZ11 813 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 C10orf88Q9H8K7 445 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 LRRC4Q9HBW1 653 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 COX16Q9P0S2 106 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 ASIC3Q9UHC3 531 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 DNPEPQ9ULA0 475 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 C3orf70A6NLC5 250 aaPredicted RBP11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 PRPSAP2O60256 369 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 EOMESO95936 686 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 GYS2P54840 703 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 CDH6P55285 790 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 BFSP2Q13515 415 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 ZC3H12AQ5D1E8 599 aaKnown RBP11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 GSTA5Q7RTV2 222 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 METTL23Q86XA0 190 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 FBXO25Q8TCJ0 367 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 RSPH1Q8WYR4 309 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 SEC14L1Q92503 715 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
SMPD4P1-201ENST00000416717 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
SMPD4P1-201ENST00000416717 GOLGA6BA6NDN3 693 aa11.17□□□□□ -0.62
SMPD4P1-201ENST00000416717 CST8O60676 142 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms