RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	CNTN3	Q9P232	1028 aa		9.38	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TCRBV21S2A2	A0A5A6	115 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PLK4	O00444	970 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	DKK1	O94907	266 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PDIA3	P30101	505 aa	Known RBP	9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	RPL9	P32969	192 aa	Known RBP	9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	AVPR1A	P37288	418 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	RCAN1	P53805	252 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	BFSP1	Q12934	665 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	NR1H3	Q13133	447 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	MGAT5B	Q3V5L5	792 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PPP4R3A	Q6IN85	833 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	NEK8	Q86SG6	692 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	C11orf74	Q86VG3	221 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PGBD3	Q8N328	593 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651		Q8N3U1	123 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TRIML1	Q8N9V2	468 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	DEPTOR	Q8TB45	409 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	BAHD1	Q8TBE0	780 aa	Predicted RBP	9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	SETD7	Q8WTS6	366 aa	Known RBP	9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	OSCP1	Q8WVF1	389 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	GTPBP3	Q969Y2	492 aa	Known RBP	9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PNMA5	Q96PV4	448 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	BCCIP	Q9P287	314 aa	Known RBP eCLIP	9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	MAFF	Q9ULX9	164 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	MAGED2	Q9UNF1	606 aa	Predicted RBP	9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TNFSF13B	Q9Y275	285 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ASB3	Q9Y575	518 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	SLCO1B1	Q9Y6L6	691 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	COL12A1	Q99715	3063 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	KNL1	Q8NG31	2342 aa		9.37	□□□□□ -0.91
NIF3L1-206	ENST00000416651	IGHV1OR15-9	A0A0B4J2B8	117 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CCDC196	A0A1B0GTZ2	297 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	C2orf78	A6NCI8	922 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TRIM24	O15164	1050 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	MARCH6	O60337	910 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PRKCSH	P14314	528 aa	Predicted RBP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	GABRG2	P18507	467 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CDC25C	P30307	473 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	KIR2DL1	P43626	348 aa	Predicted RBP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	AARS	P49588	968 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	KDSR	Q06136	332 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	GRIK2	Q13002	908 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	USP4	Q13107	963 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PDGFRL	Q15198	375 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ECM1	Q16610	540 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	PLEKHG6	Q3KR16	790 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ZNF568	Q3ZCX4	644 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	OVOS1	Q6IE37	1185 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CC2D1A	Q6P1N0	951 aa	Predicted RBP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	KRT25	Q7Z3Z0	450 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	GLRX5	Q86SX6	157 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	MON1A	Q86VX9	555 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CATSPER3	Q86XQ3	398 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	MIB1	Q86YT6	1006 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	FMNL3	Q8IVF7	1028 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CPA6	Q8N4T0	437 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ARL14EP	Q8N8R7	260 aa	Predicted RBP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	FAM181A	Q8N9Y4	354 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	HSPA12B	Q96MM6	686 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CCDC94	Q9BW85	323 aa	Predicted RBP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	C2orf40	Q9H1Z8	148 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CLMP	Q9H6B4	373 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TRPC7	Q9HCX4	862 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CALCOCO1	Q9P1Z2	691 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	APOBEC2	Q9Y235	224 aa	Known RBP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	FNDC3A	Q9Y2H6	1198 aa	Known RBP	9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TEX15	Q9BXT5	2789 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CABIN1	Q9Y6J0	2220 aa		9.36	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ANAPC1	Q9H1A4	1944 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	OR6C75	A6NL08	312 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CXCL8	P10145	99 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	HAPLN1	P10915	354 aa	Predicted RBP	9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CYP11B2	P19099	503 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TNFSF9	P41273	254 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TXK	P42681	527 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	NAMPT	P43490	491 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	IFNAR2	P48551	515 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	YARS	P54577	528 aa	Known RBP	9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	LY6D	Q14210	128 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	SCARA3	Q6AZY7	606 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	DHRS13	Q6UX07	377 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	DSTYK	Q6XUX3	929 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ITIH5	Q86UX2	942 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	SH3RF2	Q8TEC5	729 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	SPACA7	Q96KW9	195 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CCDC43	Q96MW1	224 aa	Known RBP	9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ACOX2	Q99424	681 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	C22orf23	Q9BZE7	217 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	ZCWPW1	Q9H0M4	648 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TMEM60	Q9H2L4	133 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TTC12	Q9H892	705 aa	Predicted RBP	9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	SLC38A7	Q9NVC3	462 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	KIAA1522	Q9P206	1035 aa	Predicted RBP	9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CYP8B1	Q9UNU6	501 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	COL6A6	A6NMZ7	2263 aa		9.35	□□□□□ -0.91
NIF3L1-206	ENST00000416651	TEP1	Q99973	2627 aa	Known RBP	9.34	□□□□□ -0.91
NIF3L1-206	ENST00000416651	BTBD18	B2RXH4	712 aa		9.34	□□□□□ -0.91
NIF3L1-206	ENST00000416651	CBX4	O00257	560 aa		9.34	□□□□□ -0.91
NIF3L1-206	ENST00000416651	KCNK3	O14649	394 aa		9.34	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms