RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 GATA6Q92908 595 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 HPDLQ96IR7 371 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 SLITRK1Q96PX8 696 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 MMS19Q96T76 1030 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 KIF2CQ99661 725 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 ATXN2Q99700 1313 aaKnown RBP10.71□□□□□ -0.69
MDC1-202ENST00000416571 PCIF1Q9H4Z3 704 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 PDE11AQ9HCR9 933 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 ARHGEF4Q9NR80 690 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 FOXD4L1Q9NU39 408 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 SMPD4Q9NXE4 827 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 TNRC6BQ9UPQ9 1833 aaKnown RBP10.71□□□□□ -0.69
MDC1-202ENST00000416571 WASF3Q9UPY6 502 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 SMC3Q9UQE7 1217 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 NEUROG3Q9Y4Z2 214 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 CPQQ9Y646 472 aa10.71□□□□□ -0.69
MDC1-202ENST00000416571 IGF2RP11717 2491 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 HELZ2Q9BYK8 2649 aaKnown RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 TCRBV21S2A2A0A5A6 115 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 SRRM3A6NNA2 597 aaPredicted RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 SGK1O00141 431 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 SCAMP3O14828 347 aaKnown RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 AP5Z1O43299 807 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 HYAL3O43820 417 aaPredicted RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 ATP2C2O75185 946 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 KAT7O95251 611 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 PDGFRBP09619 1106 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 MBL2P11226 248 aaPredicted RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 ADH5P11766 374 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 LMO2P25791 158 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 PTGER3P43115 390 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 SLC6A11P48066 632 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 USP46P62068 366 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 SIM1P81133 766 aaPredicted RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 SLC7A9P82251 487 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 KDSRQ06136 332 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 IFRD2Q12894 506 aaPredicted RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 DHCR24Q15392 516 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 SURF1Q15526 300 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 PREPLQ4J6C6 727 aaPredicted RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 SPDYCQ5MJ68 293 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 TDRD10Q5VZ19 366 aaKnown RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 RRAGBQ5VZM2 374 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 SLC23A3Q6PIS1 610 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 NUDT18Q6ZVK8 323 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 HS2ST1Q7LGA3 356 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 ADGRG2Q8IZP9 1017 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 GPD1LQ8N335 351 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 ZSWIM2Q8NEG5 633 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 OLIG1Q8TAK6 271 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 EPSTI1Q96J88 318 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 TMX3Q96JJ7 454 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 FAM84AQ96KN4 292 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 CBWD1Q9BRT8 395 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 GTPBP2Q9BX10 602 aaKnown RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 TMEM121BQ9BXQ6 578 aaPredicted RBP10.7□□□□□ -0.7
MDC1-202ENST00000416571 SNX25Q9H3E2 840 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 OLFML3Q9NRN5 406 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 CFAP97Q9P2B7 532 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 TBC1D14Q9P2M4 693 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 SIX4Q9UIU6 781 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 PLXND1Q9Y4D7 1925 aa10.7□□□□□ -0.7
MDC1-202ENST00000416571 CEP192Q8TEP8 1941 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 ADAMTS9Q9P2N4 1935 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 TBC1D3BA6NDS4 549 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 ZNF840PA6NDX5 716 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 ANTXRLA6NF34 631 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 CYSRT1A8MQ03 144 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 F8VP50 259 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 H0Y626 953 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 KIAA0391O15091 583 aaKnown RBP10.69□□□□□ -0.7
MDC1-202ENST00000416571 ZBTB24O43167 697 aaPredicted RBP10.69□□□□□ -0.7
MDC1-202ENST00000416571 PRPF6O94906 941 aaKnown RBP10.69□□□□□ -0.7
MDC1-202ENST00000416571 TRIM16O95361 564 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 HNRNPLP14866 589 aaKnown RBP eCLIP10.69□□□□□ -0.7
MDC1-202ENST00000416571 HOXD12P35452 270 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 GRIA2P42262 883 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 TNFRSF4P43489 277 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 NOP14P78316 857 aaKnown RBP10.69□□□□□ -0.7
MDC1-202ENST00000416571 ZXDBP98169 803 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 RPL6Q02878 288 aaKnown RBP10.69□□□□□ -0.7
MDC1-202ENST00000416571 GFPT1Q06210 699 aaPredicted RBP10.69□□□□□ -0.7
MDC1-202ENST00000416571 DUOXA1Q1HG43 343 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 GAB4Q2WGN9 574 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 BTBD8Q5XKL5 378 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 TRMT11Q7Z4G4 463 aaKnown RBP10.69□□□□□ -0.7
MDC1-202ENST00000416571 RABEPKQ7Z6M1 372 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 CEP76Q8TAP6 659 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 CXorf38Q8TB03 319 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 MYCBPAPQ8TBZ2 947 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 KBTBD7Q8WVZ9 684 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 PCED1BQ96HM7 432 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 FNBP1Q96RU3 617 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 TTLL2Q9BWV7 592 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 RNF38Q9H0F5 515 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 CRTAC1Q9NQ79 661 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 TMEM74BQ9NUR3 256 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 INTS13Q9NVM9 706 aa10.69□□□□□ -0.7
MDC1-202ENST00000416571 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms