RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 CACNA2D1P54289 1103 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 MAP7D1Q3KQU3 841 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 SPDYCQ5MJ68 293 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 CBWD2Q8IUF1 395 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 SYCP3Q8IZU3 236 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 FRMD1Q8N878 549 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 TXNDC5Q8NBS9 432 aaKnown RBP12.98□□□□□ -0.33
LIMS2-210ENST00000413578 GLIS3Q8NEA6 775 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 ZFRQ96KR1 1074 aaKnown RBP12.98□□□□□ -0.33
LIMS2-210ENST00000413578 CLIC6Q96NY7 704 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 MRPL45Q9BRJ2 306 aaKnown RBP12.98□□□□□ -0.33
LIMS2-210ENST00000413578 TMEM74BQ9NUR3 256 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.98□□□□□ -0.33
LIMS2-210ENST00000413578 CPQQ9Y646 472 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 ANAPC1Q9H1A4 1944 aa12.98□□□□□ -0.33
LIMS2-210ENST00000413578 BAHCC1Q9P281 2608 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 TMEM8BA6NDV4 472 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 UPK3BL1B0FP48 263 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 UPK3BL2E5RIL1 263 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 SLC9A3R1O14745 358 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-210ENST00000413578 TRIM66O15016 1216 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 ALDH1A2O94788 518 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 PDGFRBP09619 1106 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 FAM163BP0C2L3 166 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 GRIA2P42262 883 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 DHPSP49366 369 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-210ENST00000413578 DUOXA2Q1HG44 320 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 EMC10Q5UCC4 262 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 PIP4P1Q86T03 277 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 SYT12Q8IV01 421 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 WDR49Q8IV35 697 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 ETFBKMTQ8IXQ9 262 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 WHAMMQ8TF30 809 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 RLN3Q8WXF3 142 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 PIGKQ92643 395 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 PNKPQ96T60 521 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 DUSP9Q99956 384 aaKnown RBP12.97□□□□□ -0.33
LIMS2-210ENST00000413578 SCNM1Q9BWG6 230 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 PANK4Q9NVE7 773 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 EHD2Q9NZN4 543 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 LAMA5O15230 3695 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 AKAP13Q12802 2813 aa12.97□□□□□ -0.33
LIMS2-210ENST00000413578 ZNF233A6NK53 670 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 SCAMP3O14828 347 aaKnown RBP12.96□□□□□ -0.33
LIMS2-210ENST00000413578 KLF8O95600 359 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-210ENST00000413578 CST3P01034 146 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-210ENST00000413578 ADH5P11766 374 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 IDEP14735 1019 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 ANXA13P27216 316 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 TIE1P35590 1138 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 CYP27A1Q02318 531 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 LMAN2Q12907 356 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 TAF10Q12962 218 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 RESTQ13127 1097 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 SURF1Q15526 300 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 MDH1BQ5I0G3 518 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 CCDC73Q6ZRK6 1079 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 LPCAT2Q7L5N7 544 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 DEFB124Q8NES8 71 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 ZNF518BQ9C0D4 1074 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 GZF1Q9H116 711 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-210ENST00000413578 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 POLMQ9NP87 494 aaPredicted RBP12.96□□□□□ -0.33
LIMS2-210ENST00000413578 SMPD4Q9NXE4 827 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 HSPBP1Q9NZL4 362 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 HCN2Q9UL51 889 aa12.96□□□□□ -0.33
LIMS2-210ENST00000413578 ZNF638Q14966 1978 aaKnown RBP12.96□□□□□ -0.34
LIMS2-210ENST00000413578 ASCC3Q8N3C0 2202 aaKnown RBP12.96□□□□□ -0.34
LIMS2-210ENST00000413578 PTPRDP23468 1912 aa12.96□□□□□ -0.34
LIMS2-210ENST00000413578 NUP205Q92621 2012 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
LIMS2-210ENST00000413578 ADH1CP00326 375 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 TNNC2P02585 160 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 APODP05090 189 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 ENGP17813 658 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 HOXD12P35452 270 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 GNL1P36915 607 aaPredicted RBP12.95□□□□□ -0.34
LIMS2-210ENST00000413578 TXLNAP40222 546 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 TNFRSF4P43489 277 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 SEMA3BQ13214 749 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 CUL4AQ13619 759 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 EOGTQ5NDL2 527 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 DDX42Q86XP3 938 aaKnown RBP eCLIP12.95□□□□□ -0.34
LIMS2-210ENST00000413578 TMEFF1Q8IYR6 380 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 OTUB2Q96DC9 234 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 SPACA7Q96KW9 195 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 ELOVL4Q9GZR5 314 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 DPEP3Q9H4B8 488 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 ZDHHC4Q9NPG8 344 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 ARHGEF4Q9NR80 690 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 IL37Q9NZH6 218 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 PILRBQ9UKJ0 227 aa12.95□□□□□ -0.34
LIMS2-210ENST00000413578 HELZP42694 1942 aaKnown RBP12.94□□□□□ -0.34
LIMS2-210ENST00000413578 TCRBV21S2A2A0A5A6 115 aa12.94□□□□□ -0.34
LIMS2-210ENST00000413578 E2F8A0AVK6 867 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms