RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 SLC5A3P53794 718 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 AMPD2Q01433 879 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 IFRD2Q12894 506 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-211ENST00000413354 TAF10Q12962 218 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 ORC1Q13415 861 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 ZNF77Q15935 545 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 CCDC40Q4G0X9 1142 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 PAQR9Q6ZVX9 377 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 FRMD5Q7Z6J6 570 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 FILIP1Q7Z7B0 1213 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 SLC2A14Q8TDB8 520 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 NELFBQ8WX92 580 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 EXOC4Q96A65 974 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 PHOX2BQ99453 314 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 FAM83CQ9BQN1 747 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 CHRDQ9H2X0 955 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 FAM49BQ9NUQ9 324 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 GTSE1Q9NYZ3 720 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 FBXO4Q9UKT5 387 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 BIN1O00499 593 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 CD44P16070 742 aaKnown RBP16.63■□□□□ 0.25
MCF2L-211ENST00000413354 SOX9P48436 509 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 IFNAR2P48551 515 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
MCF2L-211ENST00000413354 SLC7A9P82251 487 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 PAK1Q13153 545 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 RUNX3Q13761 415 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 TTI2Q6NXR4 508 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 DDX42Q86XP3 938 aaKnown RBP eCLIP16.63■□□□□ 0.25
MCF2L-211ENST00000413354 CPA6Q8N4T0 437 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 KIAA1958Q8N8K9 716 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 SH3RF2Q8TEC5 729 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 OSCP1Q8WVF1 389 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 SEMA4DQ92854 862 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 ATP2A3Q93084 1043 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 SLC35C1Q96A29 364 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 SLC22A12Q96S37 553 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 KCNK16Q96T55 309 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 HNRNPABQ99729 332 aaKnown RBP16.63■□□□□ 0.25
MCF2L-211ENST00000413354 SEMA4AQ9H3S1 761 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 FBXO44Q9H4M3 255 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 CSNK1G1Q9HCP0 422 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 PNPLA8Q9NP80 782 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
MCF2L-211ENST00000413354 PPP1R3GB7ZBB8 358 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 GNA14O95837 355 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 OLFM2O95897 454 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 ABL1P00519 1130 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 OAS1P00973 400 aaKnown RBP16.62■□□□□ 0.25
MCF2L-211ENST00000413354 ADORA2BP29275 332 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 TNK2Q07912 1038 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 CETN1Q12798 172 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 FZD5Q13467 585 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 PPP2R5DQ14738 602 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 ZNF528Q3MIS6 628 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 DGKKQ5KSL6 1271 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 ZNF687Q8N1G0 1237 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 C12orf29Q8N999 325 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 CYFIP2Q96F07 1278 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 TWNKQ96RR1 684 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 CYP2S1Q96SQ9 504 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 SMOQ99835 787 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 EBF3Q9H4W6 596 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 LMAN1LQ9HAT1 526 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 HPS4Q9NQG7 708 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 DUS2Q9NX74 493 aaKnown RBP16.62■□□□□ 0.25
MCF2L-211ENST00000413354 IL37Q9NZH6 218 aa16.62■□□□□ 0.25
MCF2L-211ENST00000413354 TNFRSF10BO14763 440 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 GFRA3O60609 400 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 FGFR1OPO95684 399 aaKnown RBP16.61■□□□□ 0.25
MCF2L-211ENST00000413354 SP9P0CG40 484 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 CHRNB1P11230 501 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 BMP6P22004 513 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 TBXAS1P24557 533 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-211ENST00000413354 TUBP50607 506 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 MAP3K7CLP57077 242 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 TRIM68Q6AZZ1 485 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 MAMSTRQ6ZN01 415 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 TTC16Q8NEE8 873 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 ZMIZ2Q8NF64 920 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 SCAMP5Q8TAC9 235 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 TTC8Q8TAM2 541 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 RIN3Q8TB24 985 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 WHAMMQ8TF30 809 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 NKD2Q969F2 451 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-211ENST00000413354 DUSP9Q99956 384 aaKnown RBP16.61■□□□□ 0.25
MCF2L-211ENST00000413354 PRMT8Q9NR22 394 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-211ENST00000413354 CISHQ9NSE2 258 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 KIAA1468Q9P260 1216 aa16.61■□□□□ 0.25
MCF2L-211ENST00000413354 FAM92AA1XBS5 289 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 SLC9A3R1O14745 358 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-211ENST00000413354 PMM2O15305 246 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 P4HA2O15460 535 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 NFATC1O95644 943 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 FMO5P49326 533 aa16.6■□□□□ 0.25
MCF2L-211ENST00000413354 CCR3P51677 355 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms