RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SLC5A3P53794 718 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 PTPN5P54829 565 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 MARSP56192 900 aaKnown RBP19.96■□□□□ 0.79
TRIM56-202ENST00000412507 KCNH2Q12809 1159 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 CUL2Q13617 745 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 ZNF268Q14587 947 aaPredicted RBP19.96■□□□□ 0.79
TRIM56-202ENST00000412507 ZNF852Q6ZMS4 543 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 CCDC105Q8IYK2 499 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 MLKLQ8NB16 471 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 DTWD2Q8NBA8 298 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 SLC4A11Q8NBS3 891 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 TTC16Q8NEE8 873 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 TTC8Q8TAM2 541 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 FBXO32Q969P5 355 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 HEXIM2Q96MH2 286 aaKnown RBP19.96■□□□□ 0.79
TRIM56-202ENST00000412507 DNAI2Q9GZS0 605 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 CSNK1G1Q9HCP0 422 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 THG1LQ9NWX6 298 aaKnown RBP19.96■□□□□ 0.79
TRIM56-202ENST00000412507 DLGAP2Q9P1A6 1054 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 FANCMQ8IYD8 2048 aa19.96■□□□□ 0.79
TRIM56-202ENST00000412507 PMM2O15305 246 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 CCDC192P0DO97 292 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 GLULP15104 373 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 TARSP26639 723 aaKnown RBP19.95■□□□□ 0.78
TRIM56-202ENST00000412507 SOX9P48436 509 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 PPP3CCP48454 512 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 RAD23BP54727 409 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 PLCB2Q00722 1185 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 NHLH1Q02575 133 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 TNK2Q07912 1038 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 PPP1R26Q5T8A7 1209 aaPredicted RBP19.95■□□□□ 0.78
TRIM56-202ENST00000412507 CLEC20AQ6ZU45 233 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 GPT2Q8TD30 523 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 JAKMIP2Q96AA8 810 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 TMEM176AQ96HP8 235 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 GKN1Q9NS71 199 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 GTSE1Q9NYZ3 720 aa19.95■□□□□ 0.78
TRIM56-202ENST00000412507 CHORDC1Q9UHD1 332 aaPredicted RBP19.95■□□□□ 0.78
TRIM56-202ENST00000412507 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.95■□□□□ 0.78
TRIM56-202ENST00000412507 H0Y858 1186 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 MAN2B1O00754 1011 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 P4HA2O15460 535 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 KPNA1P52294 538 aaPredicted RBP19.94■□□□□ 0.78
TRIM56-202ENST00000412507 CREBRFQ8IUR6 639 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 LMO3Q8TAP4 145 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 NT5C1BQ96P26 610 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 RNF38Q9H0F5 515 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 FAM124BQ9H5Z6 455 aaPredicted RBP19.94■□□□□ 0.78
TRIM56-202ENST00000412507 IL37Q9NZH6 218 aa19.94■□□□□ 0.78
TRIM56-202ENST00000412507 NDRG2Q9UN36 371 aaKnown RBP19.94■□□□□ 0.78
TRIM56-202ENST00000412507 AFPP02771 609 aaKnown RBP19.93■□□□□ 0.78
TRIM56-202ENST00000412507 TBXAS1P24557 533 aaPredicted RBP19.93■□□□□ 0.78
TRIM56-202ENST00000412507 PDE6CP51160 858 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 YWHAEP62258 255 aaKnown RBP19.93■□□□□ 0.78
TRIM56-202ENST00000412507 CETN1Q12798 172 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 USP4Q13107 963 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 ZNF77Q15935 545 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 DPCR1Q3MIW9 517 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 TRIM68Q6AZZ1 485 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 GPRIN1Q7Z2K8 1008 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 UBR7Q8N806 425 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 PDZD8Q8NEN9 1154 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 OVCA2Q8WZ82 227 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 FAM3CQ92520 227 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 CNOT6LQ96LI5 555 aaKnown RBP19.93■□□□□ 0.78
TRIM56-202ENST00000412507 NELL2Q99435 816 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 FAM83CQ9BQN1 747 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 OSBPL6Q9BZF3 934 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 COMMD8Q9NX08 183 aa19.93■□□□□ 0.78
TRIM56-202ENST00000412507 MRPS17Q9Y2R5 130 aaKnown RBP19.93■□□□□ 0.78
TRIM56-202ENST00000412507 HHLA1C9JL84 531 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 GOLGA6L22H0YM25 854 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 OAS1P00973 400 aaKnown RBP19.92■□□□□ 0.78
TRIM56-202ENST00000412507 PFKLP17858 780 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 MTF1Q14872 753 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 CC2D1AQ6P1N0 951 aaPredicted RBP19.92■□□□□ 0.78
TRIM56-202ENST00000412507 PPM1KQ8N3J5 372 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 EHBP1Q8NDI1 1231 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 SH3RF2Q8TEC5 729 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 DUSP16Q9BY84 665 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 EBF3Q9H4W6 596 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 C8orf33Q9H7E9 229 aaPredicted RBP19.92■□□□□ 0.78
TRIM56-202ENST00000412507 HPS4Q9NQG7 708 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 GMIPQ9P107 970 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 ARHGAP26Q9UNA1 814 aa19.92■□□□□ 0.78
TRIM56-202ENST00000412507 KIAA1549LQ6ZVL6 1849 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 FAM92AA1XBS5 289 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 SPECC1L-ADORA2AF8WAN1 911 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 OLFM2O95897 454 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 MLLT6P55198 1093 aaPredicted RBP19.91■□□□□ 0.78
TRIM56-202ENST00000412507 SLC7A9P82251 487 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 ZXDBP98169 803 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 FZD5Q13467 585 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 ANGPT1Q15389 498 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 TPD52L1Q16890 204 aaPredicted RBP19.91■□□□□ 0.78
TRIM56-202ENST00000412507 ITPRIPL2Q3MIP1 535 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 ARHGAP17Q68EM7 881 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 IRF2BP1Q8IU81 584 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 ARHGEF19Q8IW93 802 aa19.91■□□□□ 0.78
TRIM56-202ENST00000412507 KAT5Q92993 513 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms