RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 NECTIN3Q9NQS3 549 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 KRT84Q9NSB2 600 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 HAUS2Q9NVX0 235 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 ISY1Q9ULR0 285 aaKnown RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 MBD3L4A6NDZ8 208 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-204ENST00000412061 MBD3L3A6NE82 208 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-204ENST00000412061 CLCA1A8K7I4 914 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 MYO1CO00159 1063 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 CYP27B1O15528 508 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 ASNA1O43681 348 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 ITGA2BP08514 1039 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 ALOX12P18054 663 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 COMTP21964 271 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 GCSHP23434 173 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 CST5P28325 142 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-204ENST00000412061 ACTN2P35609 894 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 POLD2P49005 469 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 SLC11A2P49281 568 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 CCR5P51681 352 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 VAMP2P63027 116 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 CTBP1Q13363 440 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 PSMD6Q15008 389 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 SMAD1Q15797 465 aaKnown RBP5.06□□□□□ -1.6
BRCA1-204ENST00000412061 TSTQ16762 297 aaKnown RBP5.06□□□□□ -1.6
BRCA1-204ENST00000412061 AMOTQ4VCS5 1084 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 LIMS2Q7Z4I7 341 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 DNAJC5GQ8N7S2 189 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 TEPSINQ96N21 525 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 ASB2Q96Q27 587 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 TMEM8AQ9HCN3 771 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 PARD6AQ9NPB6 346 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 TMEM160Q9NX00 188 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 RGL1Q9NZL6 768 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 TBC1D29Q9UFV1 150 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 HERC5Q9UII4 1024 aaKnown RBP5.06□□□□□ -1.6
BRCA1-204ENST00000412061 AGAP1Q9UPQ3 857 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 LMTK3Q96Q04 1460 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 NCANO14594 1321 aa5.06□□□□□ -1.6
BRCA1-204ENST00000412061 A0A087WWL8 130 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 CCDC196A0A1B0GTZ2 297 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 PI4KAP2A4QPH2 592 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 GOLGA6L6A8MZA4 724 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 E9PLN8 166 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 FCHO1O14526 889 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 PRRG2O14669 202 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 STARD3NLO95772 234 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 PIM1P11309 404 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-204ENST00000412061 GYS1P13807 737 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 RXRAP19793 462 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 KLRC1P26715 233 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 GABRB3P28472 473 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 CARSP49589 748 aaKnown RBP5.05□□□□□ -1.6
BRCA1-204ENST00000412061 RABGGTBP53611 331 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 SEC24CP53992 1094 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 PRKAA2P54646 552 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 UCP3P55916 312 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 POLE2P56282 527 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 CHRNDQ07001 517 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 SLFN5Q08AF3 891 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 ERV3-1Q14264 604 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 NOMO2Q5JPE7 1267 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 SLC9C2Q5TAH2 1124 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 FAM160B1Q5W0V3 765 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 NAIF1Q69YI7 327 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-204ENST00000412061 ACAD10Q6JQN1 1059 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 USP49Q70CQ1 688 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 HTR3DQ70Z44 454 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 CHD1LQ86WJ1 897 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 MICU3Q86XE3 530 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 SYT12Q8IV01 421 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 ZFPM1Q8IX07 1006 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 MPP5Q8N3R9 675 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 SLC15A4Q8N697 577 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 PDPRQ8NCN5 879 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 FAM46DQ8NEK8 389 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 ADAMTS15Q8TE58 950 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 FAM89AQ96GI7 184 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 RADILQ96JH8 1075 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 VKORC1Q9BQB6 163 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 KRTAP17-1Q9BYP8 105 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 MAGEB5Q9BZ81 275 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 TAF1DQ9H5J8 278 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-204ENST00000412061 A1CFQ9NQ94 594 aaKnown RBP5.05□□□□□ -1.6
BRCA1-204ENST00000412061 PLSCR4Q9NRQ2 329 aa5.05□□□□□ -1.6
BRCA1-204ENST00000412061 CWC25Q9NXE8 425 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-204ENST00000412061 PATE3B3GLJ2 98 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 PYCARD-AS1I3L0S3 204 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 PRICKLE3O43900 615 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 DHX16O60231 1041 aaKnown RBP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 DKC1O60832 514 aaKnown RBP eCLIP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 URI1O94763 535 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 PRSS23O95084 383 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 KIF20AO95235 890 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 A1BGP04217 495 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 FCER1AP12319 257 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 BUD31P41223 144 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 AARSP49588 968 aaKnown RBP eCLIP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 PTTG1IPP53801 180 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 NHLH2Q02577 135 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 PIGFQ07326 219 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms