RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 MTSS1LQ765P7 747 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 KIF18BQ86Y91 864 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 SLC35F6Q8N357 371 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 PARP8Q8N3A8 854 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 KIAA1143Q96AT1 154 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 KLHL5Q96PQ7 755 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 HGH1Q9BTY7 390 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 CATSPERZQ9NTU4 200 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF225Q9UK10 706 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 TBC1D24Q9ULP9 559 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 PCDHA12Q9UN75 941 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 BCLAF3A2AJT9 711 aaKnown RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 EIF4E1BA6NMX2 242 aaKnown RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 VSTM5A8MXK1 200 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 MYL12BO14950 172 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 RNMTO43148 476 aaKnown RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 PECAM1P16284 738 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 MAGEA4P43358 317 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 EIF4A1P60842 406 aaKnown RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 RAB32Q13637 225 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 POLA2Q14181 598 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 MAD2L1BPQ15013 274 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 ARSHQ5FYA8 562 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 FAM47AQ5JRC9 791 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 PITRM1Q5JRX3 1037 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 FBXO47Q5MNV8 452 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 LRRC31Q6UY01 552 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 PIK3AP1Q6ZUJ8 805 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 FAM217AQ8IXS0 508 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 SYTL1Q8IYJ3 562 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 OR7D4Q8NG98 312 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 OR5J2Q8NH18 312 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 HPS3Q969F9 1004 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 WWP1Q9H0M0 922 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 TTYH1Q9H313 450 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 FBXO9Q9UK97 447 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 PCDHGA5Q9Y5G8 931 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 GMPPBQ9Y5P6 360 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 RAB19A4D1S5 217 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ECM2O94769 699 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 FARP2O94887 1054 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 AHSA1O95433 338 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 HIST1H2ABP04908 130 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PGM1P36871 562 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 GRIA1P42261 906 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF41P51814 821 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 RIDAP52758 137 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 BIDP55957 195 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PAK1Q13153 545 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MSLNQ13421 630 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MYBPC3Q14896 1274 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 POLD3Q15054 466 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 NR6A1Q15406 480 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PRMT9Q6P2P2 845 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 FBXO38Q6PIJ6 1188 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 HIST3H2AQ7L7L0 130 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 HIST1H2ACQ93077 130 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 DHTKD1Q96HY7 919 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CCDC106Q9BWC9 280 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 UBP1Q9NZI7 540 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 HSPA12AO43301 675 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ENSAO43768 121 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PHF2O75151 1096 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 DEDDO75618 318 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 FCER2P06734 321 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MTHFSP49914 203 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 POLR2FP61218 127 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 GTF2IP78347 998 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PMPCAQ10713 525 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 TIGD2Q4W5G0 525 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 BEND6Q5SZJ8 279 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CASP12Q6UXS9 341 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CCNI2Q6ZMN8 369 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 R3HCC1LQ7Z5L2 792 aaKnown RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 SLC22A15Q8IZD6 547 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ATPAF2Q8N5M1 289 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MEIOBQ8N635 442 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 MYD88Q99836 296 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 EPB41L4BQ9H329 900 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF334Q9HCZ1 680 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 RNF123Q5XPI4 1314 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZC3H11AO75152 810 aaKnown RBP eCLIP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 TNFAIP8O95379 198 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 TSPAN19P0C672 248 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ACTR2P61160 394 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 SULT2A1Q06520 285 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 PDE4DQ08499 809 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 AMZ1Q400G9 498 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 GTF2H5Q6ZYL4 71 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 NECAB2Q7Z6G3 386 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF654Q8IZM8 581 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 NANPQ8TBE9 248 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 CENPIQ92674 756 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-202ENST00000411767 NXNL1Q96CM4 212 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 COX4I2Q96KJ9 171 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 NT5C3AQ9H0P0 336 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 FANCFQ9NPI8 374 aa4.73□□□□□ -1.65
PTPN13-202ENST00000411767 A0A087X0B3 334 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms