RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ZNF853P0CG23 659 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 FCGR1AP12314 374 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 RXRAP19793 462 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 SPRR2DP22532 72 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 APEX1P27695 318 aaKnown RBP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 CASRP41180 1078 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 ECI1P42126 302 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 PMS1P54277 932 aaKnown RBP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 UCNP55089 124 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 CRYZQ08257 329 aaKnown RBP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 KCNAB2Q13303 367 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 GBX1Q14549 363 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 TBC1D25Q3MII6 688 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 LARP7Q4G0J3 582 aaKnown RBP eCLIP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 AARS2Q5JTZ9 985 aaKnown RBP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 WSCD1Q658N2 575 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 ANO7Q6IWH7 933 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 OTOP3Q7RTS5 596 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 ADGRD2Q7Z7M1 963 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 PIANPQ8IYJ0 282 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 GALNT4Q8N4A0 578 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 TPRX1Q8N7U7 411 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 MYCBPAPQ8TBZ2 947 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 MORC4Q8TE76 937 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 RNF34Q969K3 372 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 LINC00479Q96M42 142 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 FGD4Q96M96 766 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 CABLES2Q9BTV7 478 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 EFHD1Q9BUP0 239 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 RAB33BQ9H082 229 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 BTBD1Q9H0C5 482 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 KAT14Q9H8E8 782 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 DECR2Q9NUI1 292 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 GTSE1Q9NYZ3 720 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 TMEM181Q9P2C4 612 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 MAGEL2Q9UJ55 1249 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 RARRES3Q9UL19 164 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 KCNK7Q9Y2U2 307 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 KLHDC2Q9Y2U9 406 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 CARHSP1Q9Y2V2 147 aaKnown RBP-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZNF337Q9Y3M9 751 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 PLEKHM1Q9Y4G2 1056 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 ROS1P08922 2347 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 SVILO95425 2214 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 MICAL3Q7RTP6 2002 aa-1.16□□□□□ -2.6
RNU4-88P-201ENST00000411220 MED13Q9UHV7 2174 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 LYSTQ99698 3801 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 PKHD1P08F94 4074 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 A0A0G2JRQ6 117 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 FAM172BPA6NC97 362 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 TBKBP1A7MCY6 615 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 FAM220BPB1ANY3 271 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 H0YL77 283 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 PHOX2AO14813 284 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 RECQL5O94762 991 aaPredicted RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 NDUFB8O95169 186 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 ECDO95905 644 aaPredicted RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 IGLV3-19P01714 112 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 A1BGP04217 495 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 ITGAVP06756 1048 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 CD34P28906 385 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 SEC61A1P61619 476 aaKnown RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 KRT83P78385 493 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 GTF2H3Q13889 308 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 PTGR1Q14914 329 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 ST3GAL2Q16842 350 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 SPINK6Q6UWN8 80 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 MFSD7Q6UXD7 560 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 EXOC3L1Q86VI1 746 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 MEX3DQ86XN8 651 aaKnown RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 CCDC103Q8IW40 242 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 CLASRPQ8N2M8 674 aaKnown RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZNF786Q8N393 782 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 RCBTB1Q8NDN9 531 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 ZFP28Q8NHY6 868 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 SLC30A5Q8TAD4 765 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 GRAPLQ8TC17 118 aaPredicted RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 PHOSPHO2Q8TCD6 241 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 SMARCD2Q92925 531 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 DAZAP1Q96EP5 407 aaKnown RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 OBSCN-AS1Q96MR7 158 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 PRICKLE1Q96MT3 831 aaPredicted RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 WDR92Q96MX6 357 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 COL21A1Q96P44 957 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 HNRNPABQ99729 332 aaKnown RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 JAM3Q9BX67 310 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 VPS37BQ9H9H4 285 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 SEBOXQ9HB31 216 aaPredicted RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 INPP5EQ9NRR6 644 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 INTS13Q9NVM9 706 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 UCKL1Q9NWZ5 548 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 WHRNQ9P202 907 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 PRODH2Q9UF12 536 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 ARMCX3Q9UH62 379 aaPredicted RBP-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 DSEQ9UL01 958 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 CSMD3Q7Z407 3707 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 TEX15Q9BXT5 2789 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 RPTORQ8N122 1335 aa-1.17□□□□□ -2.6
RNU4-88P-201ENST00000411220 SVEP1Q4LDE5 3571 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms