RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ZC2HC1CQ53FD0 456 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CCDC157Q569K6 752 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LY6G5CQ5SRR4 150 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 C10orf76Q5T2E6 689 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 C6orf118Q5T5N4 469 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 C9orf57Q5W0N0 161 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 BTBD8Q5XKL5 378 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 JADE1Q6IE81 842 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 RINT1Q6NUQ1 792 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 RHBDF2Q6PJF5 856 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DHRS13Q6UX07 377 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 C1orf186Q6ZWK4 172 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 FILIP1Q7Z7B0 1213 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 C12orf40Q86WS4 652 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DDX42Q86XP3 938 aaKnown RBP eCLIP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MARCH9Q86YJ5 346 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SPATA2LQ8IUW3 424 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LURAP1LQ8IV03 231 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SFTPA1Q8IWL2 248 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SCN4BQ8IWT1 228 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DIS3L2Q8IYB7 885 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CHPFQ8IZ52 775 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DAW1Q8N136 415 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM130Q8N3G9 435 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 KRI1Q8N9T8 703 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TMEM161BQ8NDZ6 487 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 STKLD1Q8NE28 680 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CADM4Q8NFZ8 388 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 BAHD1Q8TBE0 780 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 SNX29Q8TEQ0 813 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 IPO4Q8TEX9 1081 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LRRC15Q8TF66 581 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LEO1Q8WVC0 666 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DNASE2BQ8WZ79 361 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TNFRSF25Q93038 417 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 OTUB2Q96DC9 234 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 WBP1Q96G27 269 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 FUBP3Q96I24 572 aaKnown RBP eCLIP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CEP295NLQ96MC4 621 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 HNRNPABQ99729 332 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ARID3AQ99856 593 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ACBD6Q9BR61 282 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LARP6Q9BRS8 491 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MSTO1Q9BUK6 570 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 RAB34Q9BZG1 259 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CCSER1Q9C0I3 900 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 NRSN2Q9GZP1 204 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 MIR1-1HGQ9H1L0 117 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ASB7Q9H672 318 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 GAREM1Q9H706 876 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 ZDHHC4Q9NPG8 344 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 IGSF5Q9NSI5 407 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PDRG1Q9NUG6 133 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DDX19AQ9NUU7 478 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TMLHEQ9NVH6 421 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TOR4AQ9NXH8 423 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 WSB2Q9NYS7 404 aaPredicted RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 EHD2Q9NZN4 543 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 TRPM5Q9NZQ8 1165 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LARSQ9P2J5 1176 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DEC1Q9P2X7 70 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 LRWD1Q9UFC0 647 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CYP8B1Q9UNU6 501 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 FNDC3AQ9Y2H6 1198 aaKnown RBP2.54□□□□□ -2
RNU4-53P-201ENST00000410828 DERAQ9Y315 318 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 NFE2L3Q9Y4A8 694 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PCDHB6Q9Y5E3 794 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 PCDHGA1Q9Y5H4 931 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 CPQQ9Y646 472 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 AK5Q9Y6K8 562 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 WDR81Q562E7 1941 aa2.54□□□□□ -2
RNU4-53P-201ENST00000410828 A0A0B4J269 797 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 A0A1B0GVT2 93 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 A0A1W2PQF6 199 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 E2F8A0AVK6 867 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ZNF840PA6NDX5 716 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 METTL12A8MUP2 240 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 B8ZZF3 427 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 E9PMD0 336 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PLK4O00444 970 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 GFRA2O00451 464 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 SCAMP3O14828 347 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 HNRNPDLO14979 420 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TRIM66O15016 1216 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 HOXC11O43248 304 aaPredicted RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 EPB41L2O43491 1005 aaKnown RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TLX3O43711 291 aaPredicted RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 FAM189A1O60320 539 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PCDHGA12O60330 932 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 DFNA5O60443 496 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PFKFB2O60825 505 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 TULP3O75386 442 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 WISP1O95388 367 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 CTDNEP1O95476 244 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 OLFM2O95897 454 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 ABL1P00519 1130 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 PIGRP01833 764 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 NTRK1P04629 796 aa2.53□□□□□ -2
RNU4-53P-201ENST00000410828 MBL2P11226 248 aaPredicted RBP2.53□□□□□ -2
RNU4-53P-201ENST00000410828 NCAM1P13591 858 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms