RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PTK7Q13308 1070 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 SAMD7Q7Z3H4 446 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 SKA1Q96BD8 255 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 KLRG1Q96E93 195 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 BTBD10Q9BSF8 475 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 DENND2DQ9H6A0 471 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 TJP2Q9UDY2 1190 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 AFG3L2Q9Y4W6 797 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 IKBKGQ9Y6K9 419 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 LGR5O75473 907 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 DLDP09622 509 aaKnown RBP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 ARFIP2P53365 341 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 BASP1P80723 227 aaKnown RBP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 CDK16Q00536 496 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 ROR1Q01973 937 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 PTPN11Q06124 597 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 TAF11Q15544 211 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 ATF7IP2Q5U623 682 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 SCARA5Q6ZMJ2 495 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 C4orf50Q6ZRC1 276 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 PLPPR4Q7Z2D5 763 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 RFWD2Q8NHY2 731 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 PTPRN2Q92932 1015 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 NSL1Q96IY1 281 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 MMADHCQ9H3L0 296 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 PIM2Q9P1W9 311 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 CORO1CQ9ULV4 474 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 TRDMT1O14717 391 aaKnown RBP17.41■□□□□ 0.38
LIMS2-208ENST00000410011 CILPO75339 1184 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 HAUS5O94927 633 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 C1QAP02745 245 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 INHBAP08476 426 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 SRGAP2CP0DJJ0 459 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 ATICP31939 592 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 GPD2P43304 727 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 MAGEA6P43360 314 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 PSMC4P43686 418 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 LBX2Q6XYB7 198 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 SLC26A11Q86WA9 606 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 IGDCC3Q8IVU1 814 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 EMC1Q8N766 993 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 ADAM33Q9BZ11 813 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 MIS12Q9H081 205 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 SYNCQ9H7C4 482 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 PAK5Q9P286 719 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 HEY2Q9UBP5 337 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 NXF1Q9UBU9 619 aaKnown RBP17.41■□□□□ 0.38
LIMS2-208ENST00000410011 SIX4Q9UIU6 781 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.41■□□□□ 0.38
LIMS2-208ENST00000410011 CHMP2BQ9UQN3 213 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 TNFSF13BQ9Y275 285 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 NUMBLQ9Y6R0 609 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 CFAP69A5D8W1 941 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 ZBTB42B2RXF5 422 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 SMNDC1O75940 238 aaKnown RBP eCLIP17.41■□□□□ 0.38
LIMS2-208ENST00000410011 GSTA2P09210 222 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 CDK18Q07002 472 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 KBTBD12Q3ZCT8 623 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 RIOX2Q8IUF8 465 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 USP6NLQ92738 828 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 TMEM176AQ96HP8 235 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 SERAC1Q96JX3 654 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 MIPEPQ99797 713 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 CNPY3Q9BT09 278 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 TRIM6Q9C030 488 aaPredicted RBP17.41■□□□□ 0.38
LIMS2-208ENST00000410011 PCSK1NQ9UHG2 260 aa17.41■□□□□ 0.38
LIMS2-208ENST00000410011 WDR91A4D1P6 747 aa17.4■□□□□ 0.38
LIMS2-208ENST00000410011 VDRP11473 427 aa17.4■□□□□ 0.38
LIMS2-208ENST00000410011 TTC39BQ5VTQ0 682 aaPredicted RBP17.4■□□□□ 0.38
LIMS2-208ENST00000410011 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
LIMS2-208ENST00000410011 APOBEC3FQ8IUX4 373 aaKnown RBP17.4■□□□□ 0.38
LIMS2-208ENST00000410011 TRIM42Q8IWZ5 723 aa17.4■□□□□ 0.38
LIMS2-208ENST00000410011 CADM1Q9BY67 442 aaKnown RBP17.4■□□□□ 0.38
LIMS2-208ENST00000410011 NFKBIZQ9BYH8 718 aa17.4■□□□□ 0.38
LIMS2-208ENST00000410011 RPF1Q9H9Y2 349 aaKnown RBP17.4■□□□□ 0.38
LIMS2-208ENST00000410011 USP29Q9HBJ7 922 aa17.4■□□□□ 0.38
LIMS2-208ENST00000410011 MKS1Q9NXB0 559 aa17.4■□□□□ 0.38
LIMS2-208ENST00000410011 DCTN4Q9UJW0 460 aa17.4■□□□□ 0.38
LIMS2-208ENST00000410011 KBTBD13C9JR72 458 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 GSC2O15499 205 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 MICAL2O94851 1124 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 ATP6V1C1P21283 382 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 GMPSP49915 693 aaPredicted RBP17.39■□□□□ 0.38
LIMS2-208ENST00000410011 FAAP100Q0VG06 881 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 PDK2Q15119 407 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 C4orf22Q6V702 233 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 CYP4V2Q6ZWL3 525 aaPredicted RBP17.39■□□□□ 0.38
LIMS2-208ENST00000410011 LRRC6Q86X45 466 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 CXorf38Q8TB03 319 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 LRRC39Q96DD0 335 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 CALN1Q9BXU9 219 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 SDCBP2Q9H190 292 aa17.39■□□□□ 0.38
LIMS2-208ENST00000410011 GOLGA8RI6L899 631 aa17.39■□□□□ 0.37
LIMS2-208ENST00000410011 TAF5Q15542 800 aa17.39■□□□□ 0.37
LIMS2-208ENST00000410011 LGSNQ5TDP6 509 aa17.39■□□□□ 0.37
LIMS2-208ENST00000410011 MAP7D3Q8IWC1 876 aa17.39■□□□□ 0.37
LIMS2-208ENST00000410011 C1orf127Q8N9H9 656 aa17.39■□□□□ 0.37
LIMS2-208ENST00000410011 HSPH1Q92598 858 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms