RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 MYRFLQ96LU7 910 aa17.54■□□□□ 0.4
SUMO1-208ENST00000409627 TTLL2Q9BWV7 592 aa17.54■□□□□ 0.4
SUMO1-208ENST00000409627 S1PR5Q9H228 398 aa17.54■□□□□ 0.4
SUMO1-208ENST00000409627 ADAM7Q9H2U9 754 aa17.54■□□□□ 0.4
SUMO1-208ENST00000409627 IL37Q9NZH6 218 aa17.54■□□□□ 0.4
SUMO1-208ENST00000409627 NOTCH4Q99466 2003 aa17.54■□□□□ 0.4
SUMO1-208ENST00000409627 HMGA1P17096 107 aaKnown RBP17.53■□□□□ 0.4
SUMO1-208ENST00000409627 TNFAIP3P21580 790 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 EPHA5P54756 1037 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 PDCLQ13371 301 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 MTMR3Q13615 1198 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 TAF12Q16514 161 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 PMF1Q6P1K2 205 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 GPRIN1Q7Z2K8 1008 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 LEMD2Q8NC56 503 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 SMRP1Q8NCR6 262 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 STKLD1Q8NE28 680 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 HLA-CQ95604 372 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 NOX5Q96PH1 765 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 PANX2Q96RD6 677 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 PCDHB18PQ96TA0 734 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 LRRC3Q9BY71 257 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 PIDD1Q9HB75 910 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 ARHGAP20Q9P2F6 1191 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 DNMT3BQ9UBC3 853 aaKnown RBP17.53■□□□□ 0.4
SUMO1-208ENST00000409627 UXTQ9UBK9 157 aaPredicted RBP17.53■□□□□ 0.4
SUMO1-208ENST00000409627 CYTH4Q9UIA0 394 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 CD207Q9UJ71 328 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 COG5Q9UP83 839 aa17.53■□□□□ 0.4
SUMO1-208ENST00000409627 SSU72P8A0A1W2PR75 194 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 FAM92AA1XBS5 289 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 PLEKP08567 350 aaPredicted RBP17.52■□□□□ 0.4
SUMO1-208ENST00000409627 UNGP13051 313 aaPredicted RBP17.52■□□□□ 0.4
SUMO1-208ENST00000409627 PTPN2P17706 415 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 ACADSBP45954 432 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 KIF11P52732 1056 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 GSDMDP57764 484 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 USP46P62068 366 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
SUMO1-208ENST00000409627 CLEC16AQ2KHT3 1053 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 CES5AQ6NT32 575 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 VPS36Q86VN1 386 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 TMC8Q8IU68 726 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 FEZF2Q8TBJ5 459 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 CORO1BQ9BR76 489 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 APOL5Q9BWW9 433 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 FBXO44Q9H4M3 255 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 LRRC4Q9HBW1 653 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 AVENQ9NQS1 362 aaPredicted RBP17.52■□□□□ 0.4
SUMO1-208ENST00000409627 ASAH2Q9NR71 780 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 SEPT11Q9NVA2 429 aaKnown RBP17.52■□□□□ 0.4
SUMO1-208ENST00000409627 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 USP3Q9Y6I4 520 aa17.52■□□□□ 0.4
SUMO1-208ENST00000409627 DOCK6Q96HP0 2047 aa17.52■□□□□ 0.39
SUMO1-208ENST00000409627 DDX3XO00571 662 aaKnown RBP eCLIP17.51■□□□□ 0.392e-27■■■■□ 21.8
SUMO1-208ENST00000409627 FGF19O95750 216 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 KCNA5P22460 613 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 FECHP22830 423 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 YWHAQP27348 245 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 RGS7P49802 495 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 TKTL1P51854 596 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 CENPCQ03188 943 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 NAA35Q5VZE5 725 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 PPP1R2P3Q6NXS1 205 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 GRASPQ7Z6J2 395 aaPredicted RBP17.51■□□□□ 0.39
SUMO1-208ENST00000409627 TMEM110Q86TL2 294 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 SCML4Q8N228 414 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 SCAMP5Q8TAC9 235 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 SLC30A5Q8TAD4 765 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 PPP1R13BQ96KQ4 1090 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 ZNF334Q9HCZ1 680 aaPredicted RBP17.51■□□□□ 0.39
SUMO1-208ENST00000409627 MAGED2Q9UNF1 606 aaPredicted RBP17.51■□□□□ 0.39
SUMO1-208ENST00000409627 ANAPC1Q9H1A4 1944 aa17.51■□□□□ 0.39
SUMO1-208ENST00000409627 NCANO14594 1321 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 H3BQ06 376 aaPredicted RBP17.5■□□□□ 0.39
SUMO1-208ENST00000409627 GABBR2O75899 941 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 RHOP08100 348 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 EIF4A3P38919 411 aaKnown RBP17.5■□□□□ 0.39
SUMO1-208ENST00000409627 MTHFRP42898 656 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 SNX16P57768 344 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 ADIGQ0VDE8 80 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 IFRD2Q12894 506 aaPredicted RBP17.5■□□□□ 0.39
SUMO1-208ENST00000409627 PTPN20Q4JDL3 420 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 PABPC1LQ4VXU2 614 aaKnown RBP17.5■□□□□ 0.39
SUMO1-208ENST00000409627 ATAT1Q5SQI0 421 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 PDZD4Q76G19 769 aaPredicted RBP17.5■□□□□ 0.39
SUMO1-208ENST00000409627 CCDC186Q7Z3E2 898 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 HS6ST3Q8IZP7 471 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 SIX6OS1Q8N1H7 587 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 MSANTD4Q8NCY6 345 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 IPO4Q8TEX9 1081 aaKnown RBP17.5■□□□□ 0.39
SUMO1-208ENST00000409627 OVCA2Q8WZ82 227 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 RIPOR3Q96MK2 946 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 CPXM1Q96SM3 734 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 CHP1Q99653 195 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 IL21Q9HBE4 155 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 CNGB3Q9NQW8 809 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 ST7Q9NRC1 585 aa17.5■□□□□ 0.39
SUMO1-208ENST00000409627 SCML2Q9UQR0 700 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms