RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SH3PXD2AQ5TCZ1 1133 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 SLC26A9Q7LBE3 791 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 GPRIN1Q7Z2K8 1008 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 ANKS1BQ7Z6G8 1248 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 TMEM173Q86WV6 379 aaPredicted RBP14.76□□□□□ -0.05
GPNMB-203ENST00000409458 ZDHHC14Q8IZN3 488 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 BCL7CQ8WUZ0 217 aaPredicted RBP14.76□□□□□ -0.05
GPNMB-203ENST00000409458 NDRG1Q92597 394 aaKnown RBP14.76□□□□□ -0.05
GPNMB-203ENST00000409458 ACSF2Q96CM8 615 aaPredicted RBP14.76□□□□□ -0.05
GPNMB-203ENST00000409458 CFAP57Q96MR6 1250 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 KCNK16Q96T55 309 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 TMEM175Q9BSA9 504 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 HERPUD2Q9BSE4 406 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 GPR62Q9BZJ7 368 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 RAB6CQ9H0N0 254 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 FAN1Q9Y2M0 1017 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 ALPK3Q96L96 1907 aa14.76□□□□□ -0.05
GPNMB-203ENST00000409458 TARSL2A2RTX5 802 aaKnown RBP14.75□□□□□ -0.05
GPNMB-203ENST00000409458 NT5C1B-RDH14C9J2C7 533 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 HHLA1C9JL84 531 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 SYN3O14994 580 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 SF3B1O75533 1304 aaKnown RBP eCLIP14.75□□□□□ -0.05
GPNMB-203ENST00000409458 DGKIO75912 1065 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 OAZ2O95190 189 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 ALDH2P05091 517 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 RAG1P15918 1043 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 BDNFP23560 247 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 NDUFV1P49821 464 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 VSNL1P62760 191 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 DEFB103AP81534 67 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 SLC7A5Q01650 507 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 SIX1Q15475 284 aaPredicted RBP14.75□□□□□ -0.05
GPNMB-203ENST00000409458 CCDC14Q49A88 953 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 VARS2Q5ST30 1063 aaKnown RBP14.75□□□□□ -0.05
GPNMB-203ENST00000409458 TMCO2Q7Z6W1 182 aaPredicted RBP14.75□□□□□ -0.05
GPNMB-203ENST00000409458 CCDC50Q8IVM0 306 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 EXD1Q8NHP7 514 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 B3GALT6Q96L58 329 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 CNPY3Q9BT09 278 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 COLEC11Q9BWP8 271 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 PLVAPQ9BX97 442 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 MCOLN1Q9GZU1 580 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 DDX47Q9H0S4 455 aaKnown RBP14.75□□□□□ -0.05
GPNMB-203ENST00000409458 LRRC4Q9HBW1 653 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 CSNK1G1Q9HCP0 422 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 ASNSD1Q9NWL6 643 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 RAB21Q9UL25 225 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 PTPRSQ13332 1948 aa14.75□□□□□ -0.05
GPNMB-203ENST00000409458 GOLGA6L10A0A0M3HER8 536 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ABHD14A-ACY1A0A1B0GW23 586 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 PI4K2BG5E9Z4 385 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 RAD51CO43502 376 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 MIPP30301 263 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 CLCN6P51797 869 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 TKTL1P51854 596 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 RBM10P98175 930 aaKnown RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ACAP1Q15027 740 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 CDO1Q16878 200 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 SMTNL2Q2TAL5 461 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 FAM171A1Q5VUB5 890 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 MFSD5Q6N075 450 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 CCDC70Q6NSX1 233 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 FUT10Q6P4F1 479 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 POLNQ7Z5Q5 900 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 SIX6OS1Q8N1H7 587 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 SLITRK1Q96PX8 696 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 PEBP4Q96S96 227 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 CWH43Q9H720 699 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ZWILCHQ9H900 591 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 DMGDHQ9UI17 866 aaKnown RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ZMYND10O75800 440 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 RNF8O76064 485 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ZRANB2O95218 330 aaKnown RBP eCLIP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ACRP10323 421 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 RALAP11233 206 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 CAPN2P17655 700 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 EN2P19622 333 aaPredicted RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 FGFR3P22607 806 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 SDC4P31431 198 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 PCK1P35558 622 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 MRPS5P82675 430 aaKnown RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ATP11AP98196 1134 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 SMC1AQ14683 1233 aaKnown RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 MAPRE1Q15691 268 aaKnown RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 SLC39A12Q504Y0 691 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 GLE1Q53GS7 698 aaKnown RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 RAB41Q5JT25 222 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 WDR93Q6P2C0 686 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 UBE2Q1Q7Z7E8 422 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 CEP57Q86XR8 500 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 PRELID2Q8N945 189 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 RAPGEF5Q92565 580 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ADAM33Q9BZ11 813 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 ULBP1Q9BZM6 244 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 PLEKHA4Q9H4M7 779 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 DDX56Q9NY93 547 aaKnown RBP14.74□□□□□ -0.05
GPNMB-203ENST00000409458 PCSK1NQ9UHG2 260 aa14.74□□□□□ -0.05
GPNMB-203ENST00000409458 FSCN2O14926 492 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms