RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 ACADSP16219 412 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 NFKBIAP25963 317 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 TUBP50607 506 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 CYP24A1Q07973 514 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 RASA2Q15283 850 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 UGCGQ16739 394 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 CTC1Q2NKJ3 1217 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 PLEKHG4Q58EX7 1191 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 ZNF362Q5T0B9 420 aaPredicted RBP17.08■□□□□ 0.33
CDK11B-204ENST00000407249 SLC2A7Q6PXP3 512 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 CLNKQ7Z7G1 428 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 KIFC3Q9BVG8 833 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 DCLRE1BQ9H816 532 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 VPS37BQ9H9H4 285 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 SAR1AQ9NR31 198 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 C6orf203Q9P0P8 240 aaPredicted RBP17.08■□□□□ 0.33
CDK11B-204ENST00000407249 NUMBLQ9Y6R0 609 aa17.08■□□□□ 0.33
CDK11B-204ENST00000407249 CFAP69A5D8W1 941 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 VARSP26640 1264 aaKnown RBP17.08■□□□□ 0.32
CDK11B-204ENST00000407249 MARK3P27448 753 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 KLC1Q07866 573 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 NFX1Q12986 1120 aaKnown RBP17.08■□□□□ 0.32
CDK11B-204ENST00000407249 MAMLD1Q13495 774 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 LVRNQ6Q4G3 990 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 USP37Q86T82 979 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 MTDHQ86UE4 582 aaKnown RBP17.08■□□□□ 0.32
CDK11B-204ENST00000407249 WDR60Q8WVS4 1066 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 SYT15Q9BQS2 421 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 CSADQ9Y600 493 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 SBF1O95248 1867 aa17.08■□□□□ 0.32
CDK11B-204ENST00000407249 ALOX15BO15296 676 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 MGEA5O60502 916 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 ZC3H11AO75152 810 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 GJC1P36383 396 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 ARSEP51690 589 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 RTP1P59025 263 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 FAM102BQ5T8I3 360 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 SLC39A4Q6P5W5 647 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 DRICH1Q6PGQ1 229 aaPredicted RBP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 CAPN12Q6ZSI9 719 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 TRMT1LQ7Z2T5 733 aaKnown RBP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 ZNF398Q8TD17 642 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 DNAJC9Q8WXX5 260 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 DCPSQ96C86 337 aaKnown RBP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 MIPEPQ99797 713 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 C11orf70Q9BRQ4 267 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 RSPH9Q9H1X1 276 aaPredicted RBP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 PPCSQ9HAB8 311 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 SLC24A2Q9UI40 661 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 SPATA31C2B4DYI2 1134 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 HNRNPCL1O60812 293 aaKnown RBP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 ICAM3P32942 547 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 NPTX2P47972 431 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 CTAG1AP78358 180 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 ZBED8Q8IZ13 594 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 MPP4Q96JB8 637 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 FAM84AQ96KN4 292 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 ADAM33Q9BZ11 813 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 JPH1Q9HDC5 661 aaPredicted RBP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 NPHS2Q9NP85 383 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 C1orf112Q9NSG2 853 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 PSMC3IPQ9P2W1 217 aaPredicted RBP17.07■□□□□ 0.32
CDK11B-204ENST00000407249 ZNF180Q9UJW8 692 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 USTQ9Y2C2 406 aa17.07■□□□□ 0.32
CDK11B-204ENST00000407249 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 LMNAP02545 664 aaKnown RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 PDHA1P08559 390 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 KRT10P13645 584 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 ETS1P14921 441 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 KRT4P19013 534 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 GPS1Q13098 491 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 IRF5Q13568 498 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 VGLL4Q14135 290 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 MORF4L2Q15014 288 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 LIN9Q5TKA1 542 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 TTC39CQ8N584 583 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 ALLCQ8N6M5 410 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 RBBP8NLQ8NC74 664 aaPredicted RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 MCPH1Q8NEM0 835 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 MRRFQ96E11 262 aaKnown RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 MRPL47Q9HD33 250 aaKnown RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 SSU72Q9NP77 194 aaKnown RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 SLC9A2Q9UBY0 812 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 H0YCG3 227 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 MAPK6Q16659 721 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 KHDC1Q4VXA5 237 aaKnown RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 EAPPQ56P03 285 aaPredicted RBP17.06■□□□□ 0.32
CDK11B-204ENST00000407249 FYB2Q5VWT5 728 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 SULF1Q8IWU6 871 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 POMGNT1Q8WZA1 660 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 IFT43Q96FT9 208 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 COMMD8Q9NX08 183 aa17.06■□□□□ 0.32
CDK11B-204ENST00000407249 ZWINTO95229 277 aa17.05■□□□□ 0.32
CDK11B-204ENST00000407249 CFHP08603 1231 aa17.05■□□□□ 0.32
CDK11B-204ENST00000407249 IREB2P48200 963 aaKnown RBP17.05■□□□□ 0.32
CDK11B-204ENST00000407249 ENPEPQ07075 957 aa17.05■□□□□ 0.32
CDK11B-204ENST00000407249 STXBP2Q15833 593 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms