RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 C3orf62Q6ZUJ4 267 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 PLPPR4Q7Z2D5 763 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 RPAINQ86UA6 219 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 PLD5Q8N7P1 536 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 FAM13CQ8NE31 585 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 RTP4Q96DX8 246 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 TACO1Q9BSH4 297 aaKnown RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 RNPEPQ9H4A4 650 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 SENP1Q9P0U3 644 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 NXF1Q9UBU9 619 aaKnown RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 USP18Q9UMW8 372 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 USH1CQ9Y6N9 552 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 CXorf49A8MYA2 514 aaPredicted RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 IRF6O14896 467 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 TGFB3P10600 412 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 CA4P22748 312 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 INCA1Q0VD86 236 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 SMYD5Q6GMV2 418 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 CAND1Q86VP6 1230 aaKnown RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 KIRREL3Q8IZU9 778 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 LRRN4Q8WUT4 740 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 N4BP2L2Q92802 583 aaPredicted RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 SKA1Q96BD8 255 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 SMC6Q96SB8 1091 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 PAIP2Q9BPZ3 127 aaKnown RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 CCDC77Q9BR77 488 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 TRIM56Q9BRZ2 755 aaKnown RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 MAGEB5Q9BZ81 275 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 PDZD7Q9H5P4 517 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 ETNK1Q9HBU6 452 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 NRBP2Q9NSY0 501 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 GPRC5DQ9NZD1 345 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 PCSK1NQ9UHG2 260 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 XPO7Q9UIA9 1087 aaKnown RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 STRIP2Q9ULQ0 834 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 GOLGA8RI6L899 631 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 C2CD2LO14523 706 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 ZBTB7AO95365 584 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 TFE3P19532 575 aaPredicted RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 ELK3P41970 407 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 ABL2P42684 1182 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 MAGEA3P43357 314 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 MRPS5P82675 430 aaKnown RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 PTPN11Q06124 597 aaPredicted RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 MXD4Q14582 209 aaPredicted RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 SLC10A6Q3KNW5 377 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 SYCP2LQ5T4T6 812 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 ILDR2Q71H61 639 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 PLCD4Q9BRC7 762 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 NFKBIZQ9BYH8 718 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 FRMD8P1Q9BZ68 369 aaPredicted RBP10.3□□□□□ -0.76
MSH2-202ENST00000406134 TNFSF13BQ9Y275 285 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 STK38LQ9Y2H1 464 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 PPME1Q9Y570 386 aa10.3□□□□□ -0.76
MSH2-202ENST00000406134 ZWINTO95229 277 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 ITGB3P05106 788 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 KRT15P19012 456 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 PRKG1Q13976 671 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 PRKD1Q15139 912 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 CA9Q16790 459 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 TAF1BQ53T94 588 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 FAM160B1Q5W0V3 765 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 FAM43BQ6ZT52 329 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 FAM183BPQ6ZVS7 135 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 CLNKQ7Z7G1 428 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 MAB21L3Q8N8X9 362 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 SLC16A10Q8TF71 515 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 SLC44A1Q8WWI5 657 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 C11orf84Q9BUA3 381 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 TBC1D10AQ9BXI6 508 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 POPDC2Q9HBU9 364 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 PDGFCQ9NRA1 345 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 LNPEPQ9UIQ6 1025 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 CHMP2BQ9UQN3 213 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 A0A0G2JLL6 359 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 C2orf71A6NGG8 1288 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 KBTBD13C9JR72 458 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 PIK3R2O00459 728 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 KRT7P08729 469 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 DLDP09622 509 aaKnown RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 ZNF143P52747 638 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 YWHAZP63104 245 aaKnown RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 KBTBD12Q3ZCT8 623 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 CCDC14Q49A88 953 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 CEP128Q6ZU80 1094 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 PRRT2Q7Z6L0 340 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 PCGF5Q86SE9 256 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 FBXO16Q8IX29 292 aaPredicted RBP10.29□□□□□ -0.76
MSH2-202ENST00000406134 ATP11CQ8NB49 1132 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 INPP5DQ92835 1189 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 PPCSQ9HAB8 311 aa10.29□□□□□ -0.76
MSH2-202ENST00000406134 CCND1P24385 295 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 EPHB2P29323 1055 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 PCK1P35558 622 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 MAGEA6P43360 314 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
MSH2-202ENST00000406134 OVGP1Q12889 678 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 FAM187BQ17R55 369 aa10.28□□□□□ -0.76
MSH2-202ENST00000406134 RFWD3Q6PCD5 774 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms