RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SAMD11Q96NU1 681 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 CRTAC1Q9NQ79 661 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 PRG3Q9Y2Y8 225 aaPredicted RBP22.09■■□□□ 1.13
TPM1-208ENST00000404484 MYO7AQ13402 2215 aa22.09■■□□□ 1.13
TPM1-208ENST00000404484 PDE2AO00408 941 aaPredicted RBP22.08■■□□□ 1.13
TPM1-208ENST00000404484 PSTPIP1O43586 416 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 ATP2C2O75185 946 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 ITGB1P05556 798 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 POU3F3P20264 500 aaPredicted RBP22.08■■□□□ 1.13
TPM1-208ENST00000404484 SCNN1AP37088 669 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 RPL34P49207 117 aaKnown RBP22.08■■□□□ 1.13
TPM1-208ENST00000404484 RGS7P49802 495 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 RWDD2BP57060 319 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 YWHAHQ04917 246 aaPredicted RBP22.08■■□□□ 1.13
TPM1-208ENST00000404484 ELAVL2Q12926 359 aaKnown RBP22.08■■□□□ 1.13
TPM1-208ENST00000404484 INTS6LQ5JSJ4 861 aaKnown RBP22.08■■□□□ 1.13
TPM1-208ENST00000404484 LPIN3Q9BQK8 851 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 METTL5Q9NRN9 209 aaKnown RBP22.08■■□□□ 1.13
TPM1-208ENST00000404484 TJP2Q9UDY2 1190 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 DNAJB4Q9UDY4 337 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 MTCH2Q9Y6C9 303 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 A0A0C4DFX4 3053 aa22.08■■□□□ 1.13
TPM1-208ENST00000404484 DESP17661 470 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 TKTP29401 623 aaKnown RBP22.08■■□□□ 1.12
TPM1-208ENST00000404484 ACAP1Q15027 740 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 SEL1L2Q5TEA6 688 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 CCDC70Q6NSX1 233 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 RHOT1Q8IXI2 618 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 SPATA4Q8NEY3 305 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 MS4A14Q96JA4 679 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 ADAM28Q9UKQ2 775 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 FAN1Q9Y2M0 1017 aa22.08■■□□□ 1.12
TPM1-208ENST00000404484 NRP1O14786 923 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 GJB6O95452 261 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 CTNNB1P35222 781 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 PEX5P50542 639 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 ERCC6LQ2NKX8 1250 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 KIAA0319Q5VV43 1072 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 FAM183BPQ6ZVS7 135 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 FAM35AQ86V20 835 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 KRT35Q92764 455 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 SMARCD1Q96GM5 515 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 RTP3Q9BQQ7 232 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 B3GNT5Q9BYG0 378 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 KRT82Q9NSB4 513 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 HCSTQ9UBK5 93 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.07■■□□□ 1.12
TPM1-208ENST00000404484 V9GYY5 206 aaPredicted RBP22.07■■□□□ 1.12
TPM1-208ENST00000404484 REV3LO60673 3130 aa22.07■■□□□ 1.12
TPM1-208ENST00000404484 SF3B1O75533 1304 aaKnown RBP eCLIP22.06■■□□□ 1.129e-6■■■■■ 68.9
TPM1-208ENST00000404484 MYBPHLA2RUH7 354 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 C5orf67F2Z3F1 127 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 H3BNC9 293 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 TULP2O00295 520 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 PSMA2P25787 234 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 RFC1P35251 1148 aaPredicted RBP22.06■■□□□ 1.12
TPM1-208ENST00000404484 SLC6A3Q01959 620 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 LRRC38Q5VT99 294 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 FAM171BQ6P995 826 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 PPM1EQ8WY54 764 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 KCTD13Q8WZ19 329 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 ALG3Q92685 438 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 PCED1BQ96HM7 432 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 RWDD3Q9Y3V2 267 aa22.06■■□□□ 1.12
TPM1-208ENST00000404484 FNDC1Q4ZHG4 1894 aaPredicted RBP22.06■■□□□ 1.12
TPM1-208ENST00000404484 UNC80Q8N2C7 3258 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 OAZ2O95190 189 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 RB1P06400 928 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 GPM6BQ13491 265 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 CCDC85BQ15834 202 aaPredicted RBP22.05■■□□□ 1.12
TPM1-208ENST00000404484 OLFML1Q6UWY5 402 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 PAQR9Q6ZVX9 377 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 PIGZQ86VD9 579 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 GPR161Q8N6U8 529 aaKnown RBP22.05■■□□□ 1.12
TPM1-208ENST00000404484 NCAPGQ9BPX3 1015 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 UBXN6Q9BZV1 441 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 USTQ9Y2C2 406 aa22.05■■□□□ 1.12
TPM1-208ENST00000404484 CARNS1A5YM72 827 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 F8W810 466 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 CLDN5O00501 218 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 AP1G2O75843 785 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 SLC11A1P49279 550 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 ELF2Q15723 593 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 DCAF12L1Q5VU92 463 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 C4orf50Q6ZRC1 276 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 CLEC20AQ6ZU45 233 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 ARCQ7LC44 396 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 MMGT1Q8N4V1 131 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 JOSD2Q8TAC2 188 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 MYLPFQ96A32 169 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 CWH43Q9H720 699 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 LRRC4Q9HBW1 653 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 PAPSS1O43252 624 aaPredicted RBP22.04■■□□□ 1.12
TPM1-208ENST00000404484 GALTP07902 379 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 GPD1P21695 349 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 SSR1P43307 286 aaKnown RBP22.04■■□□□ 1.12
TPM1-208ENST00000404484 MARCKSL1P49006 195 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 ZNF143P52747 638 aaPredicted RBP22.04■■□□□ 1.12
TPM1-208ENST00000404484 OGDHQ02218 1023 aa22.04■■□□□ 1.12
TPM1-208ENST00000404484 ZNF252P-AS1Q0IIN9 211 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms