RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 TMEM191BP0C7N4 346 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 KCNA4P22459 653 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 GRIA2P42262 883 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ATP5OP48047 213 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 AP2B1P63010 937 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 GCNT1Q02742 428 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 LIN52Q52LA3 116 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 PLEKHA7Q6IQ23 1121 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 MAP4K3Q8IVH8 894 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 SEPT12Q8IYM1 358 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 PIP4K2CQ8TBX8 421 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ABTB1Q969K4 478 aaPredicted RBP9.98□□□□□ -0.81
SMC1B-202ENST00000404354 E2F7Q96AV8 911 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 FAF2Q96CS3 445 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 PGLYRP2Q96PD5 576 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 RIT2Q99578 217 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 SPATA16Q9BXB7 569 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 EHMT1Q9H9B1 1298 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 MAN1C1Q9NR34 630 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 GPATCH2LQ9NWQ4 482 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 RBAKQ9NYW8 714 aaPredicted RBP9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ZNF212Q9UDV6 495 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ZNF536O15090 1300 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 SBF2Q86WG5 1849 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ZNF862O60290 1169 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 APRTP07741 180 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 CD1EP15812 388 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 CRADDP78560 199 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 MYBPC2Q14324 1141 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 TMPRSS6Q8IU80 811 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 HACE1Q8IYU2 909 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 NDUFAF2Q8N183 169 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 SNRNP27Q8WVK2 155 aaKnown RBP9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ATXN7L3BQ96GX2 97 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 MASTLQ96GX5 879 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 MFSD14AQ96MC6 490 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ZDHHC15Q96MV8 337 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 PCDH9Q9HC56 1237 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 AGO2Q9UKV8 859 aaKnown RBP9.98□□□□□ -0.81
SMC1B-202ENST00000404354 SHOC2Q9UQ13 582 aa9.98□□□□□ -0.81
SMC1B-202ENST00000404354 ZNFX1Q9P2E3 1918 aaKnown RBP9.98□□□□□ -0.81
SMC1B-202ENST00000404354 IQANK1A0A1B0GTG1 560 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 ACO1P21399 889 aaKnown RBP9.97□□□□□ -0.81
SMC1B-202ENST00000404354 RAP1GAPP47736 663 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 RPL10AP62906 217 aaKnown RBP9.97□□□□□ -0.81
SMC1B-202ENST00000404354 KLHL38Q2WGJ6 581 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 MMEL1Q495T6 779 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 SCYL2Q6P3W7 929 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TRMT10BQ6PF06 316 aaKnown RBP9.97□□□□□ -0.81
SMC1B-202ENST00000404354 RNF111Q6ZNA4 994 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 HPS6Q86YV9 775 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 RELL1Q8IUW5 271 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 ARHGAP24Q8N264 748 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 MZB1Q8WU39 189 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TRIM11Q96F44 468 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 LMCD1Q9NZU5 365 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TRPA1O75762 1119 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 GSTA2P09210 222 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 NELFEP18615 380 aaKnown RBP9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TNFSF9P41273 254 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 INHBCP55103 352 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 NCKAP1LP55160 1127 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 RPS6P62753 249 aaKnown RBP9.97□□□□□ -0.81
SMC1B-202ENST00000404354 AOC3Q16853 763 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 IYDQ6PHW0 289 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 B3GNT9Q6UX72 402 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMC1B-202ENST00000404354 USP37Q86T82 979 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 SP8Q8IXZ3 490 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 NAT8LQ8N9F0 302 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 CHURC1Q8WUH1 139 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TFAP2BQ92481 460 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 APOPT1Q96IL0 206 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 MPP4Q96JB8 637 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 RMDN3Q96TC7 470 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TIPINQ9BVW5 301 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 APPL1Q9UKG1 709 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 ADAMTS6Q9UKP5 1117 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 SNCAIPQ9Y6H5 919 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 CAPN8A6NHC0 703 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TM9SF1O15321 606 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 ITM2AO43736 263 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 KRT19P08727 400 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 ETV4P43268 484 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 CDH8P55286 799 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 BPIFB4P59827 614 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 USP46P62068 366 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 PTP4A2Q12974 167 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 MED21Q13503 144 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 TAS1R3Q7RTX0 852 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 IWS1Q96ST2 819 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 HAPLN2Q9GZV7 340 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 POLR3FQ9H1D9 316 aaPredicted RBP9.97□□□□□ -0.81
SMC1B-202ENST00000404354 PDP2Q9P2J9 529 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 FBXO40Q9UH90 709 aa9.97□□□□□ -0.81
SMC1B-202ENST00000404354 A0A0B4J269 797 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms