RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 FAM71DQ8N9W8 422 aa17.74■□□□□ 0.43
DNMT3A-205ENST00000402667 NPLOC4Q8TAT6 608 aa17.74■□□□□ 0.43
DNMT3A-205ENST00000402667 GDAP1Q8TB36 358 aa17.74■□□□□ 0.43
DNMT3A-205ENST00000402667 SPATA18Q8TC71 538 aa17.74■□□□□ 0.43
DNMT3A-205ENST00000402667 MAK16Q9BXY0 300 aaKnown RBP17.74■□□□□ 0.43
DNMT3A-205ENST00000402667 GCOM2Q9BZD3 368 aaPredicted RBP17.74■□□□□ 0.43
DNMT3A-205ENST00000402667 NME7Q9Y5B8 376 aa17.74■□□□□ 0.43
DNMT3A-205ENST00000402667 IQCA1LA6NCM1 817 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 MCF2LO15068 1137 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 CDO1Q16878 200 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 CCDC14Q49A88 953 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 ARHGEF18Q6ZSZ5 1173 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 PLEKHH3Q7Z736 793 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 TRABD2AQ86V40 505 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 TTC30AQ86WT1 665 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 ANKMY2Q8IV38 441 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 TAB3Q8N5C8 712 aaPredicted RBP17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 PPP1R13LQ8WUF5 828 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 SNX27Q96L92 541 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 NKIRAS1Q9NYS0 192 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 TUBGCP4Q9UGJ1 667 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 HES2Q9Y543 173 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 PRPSAP2O60256 369 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 SNX3O60493 162 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 GPX6P59796 221 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 NR1H3Q13133 447 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 MSS51Q4VC12 460 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 NPNTQ6UXI9 565 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 PNMA8AQ86V59 439 aaPredicted RBP17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 CNPY4Q8N129 248 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 FAM49BQ9NUQ9 324 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 FGFR1OP2Q9NVK5 253 aa17.73■□□□□ 0.43
DNMT3A-205ENST00000402667 TCRBV7S3A2A0A539 114 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 STX2P32856 288 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 ARL4CP56559 192 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 ATP11AP98196 1134 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 DPYSL3Q14195 570 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 NUGGCQ68CJ6 796 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 OLFML1Q6UWY5 402 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 APBB1IPQ7Z5R6 666 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 C18orf25Q96B23 403 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 OSMRQ99650 979 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 SLC4A5Q9BY07 1137 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 PHACTR1Q9C0D0 580 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 CLUHO75153 1309 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 DYNC1LI2O43237 492 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 ATP2C2O75185 946 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 GHRP10912 638 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 RDXP35241 583 aaKnown RBP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 YARSP54577 528 aaKnown RBP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 NRLP54845 237 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 NOMO1Q15155 1222 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 PKN2Q16513 984 aaKnown RBP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 GLRA4Q5JXX5 417 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 PPP1R21Q6ZMI0 780 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 TMEM110Q86TL2 294 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 PYROXD1Q8WU10 500 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 SLC35F5Q8WV83 523 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 KHSRPQ92945 711 aaKnown RBP eCLIP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 RNF19AQ9NV58 838 aa17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 ZMYND8Q9ULU4 1186 aaPredicted RBP17.72■□□□□ 0.43
DNMT3A-205ENST00000402667 FAM47DPA6NHR8 397 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 TMEM63AO94886 807 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 OAS1P00973 400 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SMIM10L2AP0DMW4 78 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SMIM10L2BP0DMW5 78 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SCTRP47872 440 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 ZC3H18Q86VM9 953 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SCUBE3Q8IX30 993 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 BEST2Q8NFU1 509 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 RNF157Q96PX1 679 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 PTPN18Q99952 460 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 UBN1Q9NPG3 1134 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 E7ESA3 106 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 DPYSL4O14531 572 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 GABBR2O75899 941 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SSTR1P30872 391 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 STIP1P31948 543 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 CDC42EP1Q00587 391 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SLC6A3Q01959 620 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 ROR1Q01973 937 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 TFDP2Q14188 446 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 FAM110CQ1W6H9 321 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 PRAMEF19Q5SWL8 479 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SCYL2Q6P3W7 929 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 NOTUMQ6P988 496 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 DARS2Q6PI48 645 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 ALKAL1Q6UXT8 129 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 LRRC52Q8N7C0 313 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 MRRFQ96E11 262 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SGSM3Q96HU1 749 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 MAGEB18Q96M61 343 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 TGS1Q96RS0 853 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 WDR83Q9BRX9 315 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 PPCSQ9HAB8 311 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 NGRNQ9NPE2 291 aaKnown RBP17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 SLC24A2Q9UI40 661 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 RABGEF1Q9UJ41 708 aa17.71■□□□□ 0.43
DNMT3A-205ENST00000402667 NRCAMQ92823 1304 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms