RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 APRTP07741 180 aa17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 POLR2BP30876 1174 aaKnown RBP17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 ATXN1P54253 815 aaKnown RBP17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 ZNF280AP59817 542 aaPredicted RBP17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 MKRN3Q13064 507 aaKnown RBP17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 PPP1R15BQ5SWA1 713 aa17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 FAM160B1Q5W0V3 765 aa17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 XYLT1Q86Y38 959 aa17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 EBF2Q9HAK2 575 aa17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 MAGED2Q9UNF1 606 aaPredicted RBP17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 COL11A1P12107 1806 aaPredicted RBP17.8■□□□□ 0.44
SNRNP70-202ENST00000401730 SYNJ2BP-COX16A0A087WUM0 186 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 SLC8A3P57103 927 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 YWHAEP62258 255 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 MCL1Q07820 350 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 MOGSQ13724 837 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 DPYSL3Q14195 570 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 TARBP2Q15633 366 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 MAP1SQ66K74 1059 aaPredicted RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 C7orf31Q8N865 590 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 FAM13CQ8NE31 585 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 CCDC110Q8TBZ0 833 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 DTX3LQ8TDB6 740 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 ZNF483Q8TF39 744 aaPredicted RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 NKD2Q969F2 451 aaPredicted RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 NUDCD1Q96RS6 583 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 B3GNT5Q9BYG0 378 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 RNPEPQ9H4A4 650 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 TXLNGQ9NUQ3 528 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 COX16Q9P0S2 106 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 CNTN6Q9UQ52 1028 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 E5RJQ4 531 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 CYB561D2O14569 222 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 INHBAP08476 426 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 ABHD2P08910 425 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 ATP2A2P16615 1042 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 PCK1P35558 622 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 VGLL4Q14135 290 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 KRT81Q14533 505 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 NAT8LQ8N9F0 302 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 CCHCR1Q8TD31 782 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 C10orf82Q8WW14 230 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 RXFP2Q8WXD0 754 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 NIFKQ9BYG3 293 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 CDT1Q9H211 546 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 DDX56Q9NY93 547 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 SHOC2Q9UQ13 582 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 DRG1Q9Y295 367 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 STARD13Q9Y3M8 1113 aa17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 MYO18AQ92614 2054 aaKnown RBP17.79■□□□□ 0.44
SNRNP70-202ENST00000401730 A0A087WZ62 844 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 TCRBV9S1A1TA0A576 114 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SIGLEC16A6NMB1 481 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 PIGRP01833 764 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 EIF4BP23588 611 aaKnown RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SERPINB3P29508 390 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 PHBP35232 272 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 ANKRD20A2Q5SQ80 823 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 ANKRD20A1Q5TYW2 823 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 ANKRD20A3Q5VUR7 823 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 TRNP1Q6NT89 227 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SCUBE3Q8IX30 993 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 UBR7Q8N806 425 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 PGLYRP2Q96PD5 576 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 FDXACB1Q9BRP7 624 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 CEP41Q9BYV8 373 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 MANSC1Q9H8J5 431 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 ELP3Q9H9T3 547 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SLC17A6Q9P2U8 582 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SMG5Q9UPR3 1016 aaKnown RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 FARP1Q9Y4F1 1045 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SNCAIPQ9Y6H5 919 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 CXorf49A8MYA2 514 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 ATG7O95352 703 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 PHKA2P46019 1235 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 IRX1P78414 480 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 PTPN11Q06124 597 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 CDHR3Q6ZTQ4 885 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 APBB1IPQ7Z5R6 666 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SLC4A11Q8NBS3 891 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 SLC7A6OSQ96CW6 309 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 FAM237BA0A1B0GVD1 139 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 KRT7P08729 469 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 STAG3L1P0CL83 205 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 TFE3P19532 575 aaPredicted RBP17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 GMPRP36959 345 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 CRADDP78560 199 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 CA9Q16790 459 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 NBPF20Q3BBV1 942 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 FYB2Q5VWT5 728 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 MPZL3Q6UWV2 235 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 CLMNQ96JQ2 1002 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 TMEM134Q9H6X4 195 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 ARL8BQ9NVJ2 186 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 ADAMTS5Q9UNA0 930 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 WDR81Q562E7 1941 aa17.78■□□□□ 0.44
SNRNP70-202ENST00000401730 C19orf81C9J6K1 198 aa17.77■□□□□ 0.44
SNRNP70-202ENST00000401730 HMGCRP04035 888 aa17.77■□□□□ 0.44
SNRNP70-202ENST00000401730 RBL1P28749 1068 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms