RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PCYOX1Q9UHG3 505 aa26.9■■□□□ 1.9
CPNE1-205ENST00000401607 ATP8B1O43520 1251 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 RNF8O76064 485 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 TYMPP19971 482 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 PCK1P35558 622 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 GATMP50440 423 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 SLC8A3P57103 927 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 DHX34Q14147 1143 aaKnown RBP26.89■■□□□ 1.9
CPNE1-205ENST00000401607 RAB6CQ53S08 254 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 INTS6LQ5JSJ4 861 aaKnown RBP26.89■■□□□ 1.9
CPNE1-205ENST00000401607 ZFYVE27Q5T4F4 411 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 FBXO46Q6PJ61 603 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-205ENST00000401607 SPOCD1Q6ZMY3 1216 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 CRIPAKQ8N1N5 446 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 KCTD13Q8WZ19 329 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 CFAP57Q96MR6 1250 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 PKMYT1Q99640 499 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 RAB6CQ9H0N0 254 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 PCDHB8Q9UN66 801 aa26.89■■□□□ 1.9
CPNE1-205ENST00000401607 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.89■■□□□ 1.89
CPNE1-205ENST00000401607 KRT7P08729 469 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 CYP2C18P33260 490 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 COILP38432 576 aaPredicted RBP26.89■■□□□ 1.89
CPNE1-205ENST00000401607 RNASELQ05823 741 aaKnown RBP26.89■■□□□ 1.89
CPNE1-205ENST00000401607 ADCY1Q08828 1119 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 ADIGQ0VDE8 80 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 SMTNL2Q2TAL5 461 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 FAM171BQ6P995 826 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 CCDC137Q6PK04 289 aaKnown RBP26.89■■□□□ 1.89
CPNE1-205ENST00000401607 OR10T2Q8NGX3 314 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 C1orf54Q8WWF1 131 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 CASD1Q96PB1 797 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 PEBP4Q96S96 227 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 SMOQ99835 787 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 TRIM51Q9BSJ1 452 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 TMEM30AQ9NV96 361 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 PCSK1NQ9UHG2 260 aa26.89■■□□□ 1.89
CPNE1-205ENST00000401607 C3orf70A6NLC5 250 aaPredicted RBP26.88■■□□□ 1.89
CPNE1-205ENST00000401607 TRUB2O95900 331 aaKnown RBP26.88■■□□□ 1.89
CPNE1-205ENST00000401607 PTPN7P35236 360 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 OR1G1P47890 313 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 CACNA2D1P54289 1103 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 MAP3K7CLP57077 242 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 KCNT1Q5JUK3 1230 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 OVOS1Q6IE37 1185 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 ZMIZ2Q8NF64 920 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 SEC14L1Q92503 715 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 MYLPFQ96A32 169 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 CHST7Q9NS84 486 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 USP18Q9UMW8 372 aa26.88■■□□□ 1.89
CPNE1-205ENST00000401607 R3HDM2Q9Y2K5 976 aaKnown RBP26.88■■□□□ 1.89
CPNE1-205ENST00000401607 ARHGEF37A1IGU5 675 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 FAM187AA6NFU0 413 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 AP1G2O75843 785 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 KRT10P13645 584 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 CETN2P41208 172 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 FNTAP49354 379 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 COPS2P61201 443 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 ADCY2Q08462 1091 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 CYP4V2Q6ZWL3 525 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-205ENST00000401607 ARCQ7LC44 396 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 JAMLQ86YT9 394 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 ABI1Q8IZP0 508 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 DNAJC5GQ8N7S2 189 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 IFT81Q8WYA0 676 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 ARMC5Q96C12 935 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 FAM193BQ96PV7 902 aaPredicted RBP26.87■■□□□ 1.89
CPNE1-205ENST00000401607 TMEM209Q96SK2 561 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 NFU1Q9UMS0 254 aa26.87■■□□□ 1.89
CPNE1-205ENST00000401607 LRRD1A4D1F6 860 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 MAP2K7O14733 419 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 PARNO95453 639 aaKnown RBP26.86■■□□□ 1.89
CPNE1-205ENST00000401607 SDC4P31431 198 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 CDKN2BP42772 138 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 CDO1Q16878 200 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 ATG4AQ8WYN0 398 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 NRDE2Q9H7Z3 1164 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 TMLHEQ9NVH6 421 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 TBX21Q9UL17 535 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 PRG3Q9Y2Y8 225 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-205ENST00000401607 hCG_1818297A0A087WSY0 165 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 KCNJ1P48048 391 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 RABGGTBP53611 331 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 ATP11AP98196 1134 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 DDX42Q86XP3 938 aaKnown RBP eCLIP26.86■■□□□ 1.89
CPNE1-205ENST00000401607 RUNDC3BQ96NL0 473 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 C11orf84Q9BUA3 381 aaPredicted RBP26.86■■□□□ 1.89
CPNE1-205ENST00000401607 RHOBTB2Q9BYZ6 727 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 DCLK3Q9C098 648 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 LRFN2Q9ULH4 789 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 TTC3P53804 2025 aa26.86■■□□□ 1.89
CPNE1-205ENST00000401607 HSPA8P11142 646 aaKnown RBP26.85■■□□□ 1.89
CPNE1-205ENST00000401607 ECHS1P30084 290 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 EPHB4P54760 987 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 TFDP3Q5H9I0 405 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 HDXQ7Z353 690 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 LRRTM3Q86VH5 581 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 NDRG1Q92597 394 aaKnown RBP26.85■■□□□ 1.89
CPNE1-205ENST00000401607 SMARCD1Q96GM5 515 aa26.85■■□□□ 1.89
CPNE1-205ENST00000401607 GDAP1L1Q96MZ0 367 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms