RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 MEI1Q5TIA1 1274 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 KIAA1841Q6NSI8 718 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 METTL23Q86XA0 190 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 ZNF677Q86XU0 584 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 KRT222Q8N1A0 295 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 ANKRD52Q8NB46 1076 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 TRIM58Q8NG06 486 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 TSGA10Q9BZW7 698 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 SAE1Q9UBE0 346 aaPredicted RBP12.3□□□□□ -0.44
SKA3-203ENST00000400018 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 TSC2P49815 1807 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 WDR27A2RRH5 827 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 GOLGA6L9A6NEM1 432 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 CEP104O60308 925 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 TBX18O95935 607 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 KRT10P13645 584 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
SKA3-203ENST00000400018 NPR3P17342 541 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 KAZNQ674X7 775 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 EP400NLQ6ZTU2 488 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 RXFP2Q8WXD0 754 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 TNIP3Q96KP6 325 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 ALS2CR12Q96Q35 445 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 YY1AP1Q9H869 796 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 RC3H2Q9HBD1 1191 aaKnown RBP12.3□□□□□ -0.44
SKA3-203ENST00000400018 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
SKA3-203ENST00000400018 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 SNX10Q9Y5X0 201 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 MRFAP1Q9Y605 127 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 NCANO14594 1321 aa12.3□□□□□ -0.44
SKA3-203ENST00000400018 MYO1FO00160 1098 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 NRG2O14511 850 aaPredicted RBP12.29□□□□□ -0.44
SKA3-203ENST00000400018 PER2O15055 1255 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 CA3P07451 260 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 FAM200BP0CF97 657 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 PYGMP11217 842 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 IRS1P35568 1242 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 BST2Q10589 180 aaKnown RBP12.29□□□□□ -0.44
SKA3-203ENST00000400018 PLEKHA7Q6IQ23 1121 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 PRUNE1Q86TP1 453 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 RBM23Q86U06 439 aaKnown RBP12.29□□□□□ -0.44
SKA3-203ENST00000400018 UNC93AQ86WB7 457 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 ZDHHC14Q8IZN3 488 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 DUSP16Q9BY84 665 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 SAR1BQ9Y6B6 198 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 SLC4A7Q9Y6M7 1214 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 HIDE1A8MVS5 230 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 DDX3YO15523 660 aaKnown RBP12.29□□□□□ -0.44
SKA3-203ENST00000400018 RHOXF2BP0C7M4 288 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 LINC00271P0C7V0 271 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 PSMA2P25787 234 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 LHX1P48742 406 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 ERVFC1P60507 584 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 NME3Q13232 169 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 OLFML1Q6UWY5 402 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 CREG2Q8IUH2 290 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 SPATA2LQ8IUW3 424 aaPredicted RBP12.29□□□□□ -0.44
SKA3-203ENST00000400018 COLGALT1Q8NBJ5 622 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 FAM81BQ96LP2 452 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 PEBP4Q96S96 227 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 PKMYT1Q99640 499 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 RHOXF2Q9BQY4 288 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 LUC7LQ9NQ29 371 aaKnown RBP12.29□□□□□ -0.44
SKA3-203ENST00000400018 CDH22Q9UJ99 828 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
SKA3-203ENST00000400018 TMEM191CA6NGB0 347 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 SEC24AO95486 1093 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 PDGFRAP16234 1089 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 BCAT1P54687 386 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 SLC7A5Q01650 507 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 RPS6KA1Q15418 735 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 DCAF6Q58WW2 860 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 TEX35Q5T0J7 233 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 PYROXD2Q8N2H3 581 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 HSPH1Q92598 858 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 TMEM169Q96HH4 297 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 HNRNPABQ99729 332 aaKnown RBP12.28□□□□□ -0.44
SKA3-203ENST00000400018 CLSTN3Q9BQT9 956 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 TTPALQ9BTX7 342 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 COLEC11Q9BWP8 271 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 LHX5Q9H2C1 402 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 JRKLQ9Y4A0 524 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 NR2E3Q9Y5X4 410 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.44
SKA3-203ENST00000400018 ZSCAN5CA6NGD5 496 aaPredicted RBP12.28□□□□□ -0.44
SKA3-203ENST00000400018 HHLA1C9JL84 531 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 CLGNO14967 610 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 INPPL1O15357 1258 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 MSI1O43347 362 aaKnown RBP12.28□□□□□ -0.44
SKA3-203ENST00000400018 DYNLT1P63172 113 aa12.28□□□□□ -0.44
SKA3-203ENST00000400018 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms