RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ACTN3Q08043 901 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 PTK7Q13308 1070 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NAA30Q147X3 362 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 APEX2Q9UBZ4 518 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 EIF3LQ9Y262 564 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SESN1Q9Y6P5 492 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NCAPD2Q15021 1401 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NMT1P30419 496 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 BTKQ06187 659 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 TRIM25Q14258 630 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 GSTA3Q16772 222 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 RABGAP1LQ5R372 815 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 CDR2LQ86X02 465 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NRSN1Q8IZ57 195 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SLC30A5Q8TAD4 765 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 DEPDC7Q96QD5 511 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 C1QTNF7Q9BXJ2 289 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 UVRAGQ9P2Y5 699 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 E2F8A0AVK6 867 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NFICP08651 508 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 GPD1P21695 349 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 GPC1P35052 558 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 XKR3Q5GH77 459 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 WLSQ5T9L3 541 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 WNK4Q96J92 1243 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SH3GL1Q99961 368 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SH3GL3Q99963 347 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 PAK5Q9P286 719 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SNAP23O00161 211 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 KPNA6O60684 536 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 ARL3P36405 182 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 CCL23P55773 120 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 RPL10AP62906 217 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SP3Q02447 781 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 FAPQ12884 760 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 USP39Q53GS9 565 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 PALB2Q86YC2 1186 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 P3H2Q8IVL5 708 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 MARCH10Q8NA82 808 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 MRPL48Q96GC5 212 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SH2D3AQ9BRG2 576 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 MKNK1Q9BUB5 465 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 PPCSQ9HAB8 311 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 IL1RL2Q9HB29 575 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 TBC1D23Q9NUY8 699 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 LNPEPQ9UIQ6 1025 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 VPS28Q9UK41 221 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 ABCA9Q8IUA7 1624 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SLC26A4O43511 780 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 SOAT2O75908 522 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 ITIH2P19823 946 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 TCF7P36402 384 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NPEPPSP55786 919 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 EMC2Q15006 297 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 C4orf22Q6V702 233 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 RBBP8NLQ8NC74 664 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 TMEM117Q9H0C3 514 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NEU2Q9Y3R4 380 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 AIM2O14862 343 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 NCAM2O15394 837 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 PEX1O43933 1283 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 ACOT2P49753 483 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 CLK1P49759 484 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 CCZ1BP86790 482 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 TAF5Q15542 800 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 LRIG3Q6UXM1 1119 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 RIN3Q8TB24 985 aa11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 RPRD1AQ96P16 312 aaPredicted RBP11.44□□□□□ -0.58
CACNA1C-215ENST00000399637 DGAT1O75907 488 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 SCGNO76038 276 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 FAM200BP0CF97 657 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 CSTF3Q12996 717 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 ACOX1Q15067 660 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 SHROOM1Q2M3G4 852 aaPredicted RBP11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 PRR5LQ6MZQ0 368 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 SOCS4Q8WXH5 440 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 VPS9D1Q9Y2B5 631 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 A0A1W2PQC6 194 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 PP2D1A8MPX8 630 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 AKR1B1P15121 316 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 RRM2P31350 389 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 PRIM2P49643 509 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 CACHD1Q5VU97 1274 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 MSL3Q8N5Y2 521 aaKnown RBP11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 NT5C1AQ9BXI3 368 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 A0A087X0T9 212 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 SNTNA6NMZ2 147 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 PCNAP12004 261 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 LONRF1Q17RB8 773 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 EFHC1Q5JVL4 640 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 LINC00523Q86TU6 105 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 HDDC3Q8N4P3 179 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 NKX2-3Q8TAU0 364 aa11.43□□□□□ -0.58
CACNA1C-215ENST00000399637 RMND5AQ9H871 391 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms