RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 MTM1Q13496 603 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 AUHQ13825 339 aaKnown RBP12.33□□□□□ -0.44
COL25A1-202ENST00000399127 OASLQ15646 514 aaKnown RBP12.33□□□□□ -0.44
COL25A1-202ENST00000399127 TUBB8Q3ZCM7 444 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 C6orf118Q5T5N4 469 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 ZNF618Q5T7W0 954 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 NLRP14Q86W24 1093 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 NT5DC4Q86YG4 428 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 FNIP1Q8TF40 1166 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 RXFP2Q8WXD0 754 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 CFAP57Q96MR6 1250 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 CCT8L2Q96SF2 557 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 RBM15Q96T37 977 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL25A1-202ENST00000399127 EBAG9O00559 213 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 NRLP54845 237 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 PRKCZQ05513 592 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 CRYMQ14894 314 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 SOWAHAQ2M3V2 549 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 C9orf57Q5W0N0 161 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 CAPN12Q6ZSI9 719 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 RFX6Q8HWS3 928 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 MYCBPAPQ8TBZ2 947 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
COL25A1-202ENST00000399127 FAM129AQ9BZQ8 928 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 MIS12Q9H081 205 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL25A1-202ENST00000399127 TBK1Q9UHD2 729 aa12.33□□□□□ -0.44
COL25A1-202ENST00000399127 A8MXQ7 604 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 SPTLC1O15269 473 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 TRPA1O75762 1119 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CCDC130P13994 396 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CHN1P15882 459 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 PECAM1P16284 738 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 LMO2P25791 158 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 RDXP35241 583 aaKnown RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CAV1Q03135 178 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 LMNB2Q03252 620 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 FASTKD3Q14CZ7 662 aaKnown RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ZBTB6Q15916 424 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 MFSD14CQ5VZR4 134 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 HIBCHQ6NVY1 386 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 SCYL2Q6P3W7 929 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 TRPV1Q8NER1 839 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 TRIB2Q92519 343 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CABS1Q96KC9 395 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 PLEKHA5Q9HAU0 1116 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 GPATCH2LQ9NWQ4 482 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ZNF236Q9UL36 1845 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 SMIM28A0A1B0GU29 152 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 EME2A4GXA9 379 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 MYADML2A6NDP7 307 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 BANF1O75531 89 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 STAU1O95793 577 aaKnown RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 TRUB2O95900 331 aaKnown RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 C6orf222P0C671 652 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CREB1P16220 341 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 GPD1P21695 349 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ADORA2BP29275 332 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 PTPN7P35236 360 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CPT1AP50416 773 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ZNF143P52747 638 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ADAM17P78536 824 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 SOX4Q06945 474 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ADCY1Q08828 1119 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 SF3A3Q12874 501 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 TRIM32Q13049 653 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CCDC142Q17RM4 750 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 APBB1IPQ7Z5R6 666 aaPredicted RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CD248Q9HCU0 757 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 NGRNQ9NPE2 291 aaKnown RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 ASNSD1Q9NWL6 643 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
COL25A1-202ENST00000399127 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.32□□□□□ -0.44
COL25A1-202ENST00000399127 C2CD4BA6NLJ0 364 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 DNALI1O14645 258 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 FGFR1P11362 822 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 AKR1A1P14550 325 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 CDH6P55285 790 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 GAD2Q05329 585 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 FSCN1Q16658 493 aaKnown RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 NPNTQ6UXI9 565 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 ALKAL1Q6UXT8 129 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 ARRDC4Q8NCT1 418 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 SLC35B2Q8TB61 432 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 CLEC4CQ8WTT0 213 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 CNTN3Q9P232 1028 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 FAM169AQ9Y6X4 670 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 TRAPPC3O43617 180 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 GABBR2O75899 941 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 MAP3K6O95382 1288 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 AGTP01019 485 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 ITGAVP06756 1048 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 IGFBP6P24592 240 aaPredicted RBP12.31□□□□□ -0.44
COL25A1-202ENST00000399127 MAGEA4P43358 317 aa12.31□□□□□ -0.44
COL25A1-202ENST00000399127 MMP13P45452 471 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms