RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 EBF1Q9UH73 591 aa11.85□□□□□ -0.51
SRMP1-201ENST00000398959 ACACBO00763 2458 aa11.85□□□□□ -0.51
SRMP1-201ENST00000398959 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
SRMP1-201ENST00000398959 KMT2BQ9UMN6 2715 aaPredicted RBP11.84□□□□□ -0.51
SRMP1-201ENST00000398959 ZNF840PA6NDX5 716 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 A8MXQ7 604 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 SLC9A3R1O14745 358 aaPredicted RBP11.84□□□□□ -0.51
SRMP1-201ENST00000398959 DCLK1O15075 740 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 FAM163BP0C2L3 166 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 CASP1P29466 404 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 OPRD1P41143 372 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 MYL6P60660 151 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 SLC7A9P82251 487 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 ZXDBP98169 803 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 CREB5Q02930 508 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 TAF10Q12962 218 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 FOXD4L6Q3SYB3 417 aaPredicted RBP11.84□□□□□ -0.51
SRMP1-201ENST00000398959 PLA2G2CQ5R387 149 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 STPG1Q5TH74 334 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 SHC4Q6S5L8 630 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 FOXD4L3Q6VB84 417 aaPredicted RBP11.84□□□□□ -0.51
SRMP1-201ENST00000398959 DDX42Q86XP3 938 aaKnown RBP eCLIP11.84□□□□□ -0.51
SRMP1-201ENST00000398959 B3GALNT2Q8NCR0 500 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 SCFD1Q8WVM8 642 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 SYAP1Q96A49 352 aaPredicted RBP11.84□□□□□ -0.51
SRMP1-201ENST00000398959 TPSD1Q9BZJ3 242 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 ZNF518BQ9C0D4 1074 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 RNF38Q9H0F5 515 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 BLZF1Q9H2G9 400 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 SLC39A2Q9NP94 309 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 RXFP3Q9NSD7 469 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 SMPD4Q9NXE4 827 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 FAM13BQ9NYF5 915 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 CGNQ9P2M7 1197 aaKnown RBP11.84□□□□□ -0.51
SRMP1-201ENST00000398959 NME7Q9Y5B8 376 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 CPQQ9Y646 472 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 ATP8B3O60423 1300 aa11.84□□□□□ -0.51
SRMP1-201ENST00000398959 K7EQS6 105 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 CLDN5O00501 218 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 SCAMP3O14828 347 aaKnown RBP11.83□□□□□ -0.52
SRMP1-201ENST00000398959 EXOC3O60645 756 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 RTN3O95197 1032 aaPredicted RBP11.83□□□□□ -0.52
SRMP1-201ENST00000398959 OAS1P00973 400 aaKnown RBP11.83□□□□□ -0.52
SRMP1-201ENST00000398959 CYP17A1P05093 508 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 MBL2P11226 248 aaPredicted RBP11.83□□□□□ -0.52
SRMP1-201ENST00000398959 YWHAQP27348 245 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 ATICP31939 592 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 AFMP43652 599 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 ME1P48163 572 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 CACNA2D1P54289 1103 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 BIRC3Q13489 604 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 USP39Q53GS9 565 aaKnown RBP11.83□□□□□ -0.52
SRMP1-201ENST00000398959 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 ANO7Q6IWH7 933 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 C11orf74Q86VG3 221 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 TTC30AQ86WT1 665 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 CCDC33Q8N5R6 958 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 USP33Q8TEY7 942 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 FBXO32Q969P5 355 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 CHAMP1Q96JM3 812 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 MED10Q9BTT4 135 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 B3GNT5Q9BYG0 378 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 CFAP97Q9P2B7 532 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 INVSQ9Y283 1065 aa11.83□□□□□ -0.52
SRMP1-201ENST00000398959 PVALEFA0A1B0GWK0 134 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 STAU1O95793 577 aaKnown RBP11.82□□□□□ -0.52
SRMP1-201ENST00000398959 CAVIN2O95810 425 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 OLFM2O95897 454 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 ADH1CP00326 375 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 APODP05090 189 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
SRMP1-201ENST00000398959 CASP4P49662 377 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 MRPS21P82921 87 aaKnown RBP11.82□□□□□ -0.52
SRMP1-201ENST00000398959 EHHADHQ08426 723 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 CUL4BQ13620 913 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 DHCR24Q15392 516 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 KNOP1Q1ED39 458 aaKnown RBP11.82□□□□□ -0.52
SRMP1-201ENST00000398959 BMT2Q1RMZ1 405 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 ZNF699Q32M78 642 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 ZNF667Q5HYK9 610 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 SCARA5Q6ZMJ2 495 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 CEP57L1Q8IYX8 460 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 ADGRG2Q8IZP9 1017 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 KIAA1958Q8N8K9 716 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 PDZD8Q8NEN9 1154 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 OVCA2Q8WZ82 227 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 TCEAL3Q969E4 200 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 PNKPQ96T60 521 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 EDEM2Q9BV94 578 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 BACH2Q9BYV9 841 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 XYLT2Q9H1B5 865 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 SMYD3Q9H7B4 428 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 TMEM30AQ9NV96 361 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 TBC1D14Q9P2M4 693 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
SRMP1-201ENST00000398959 EPG5Q9HCE0 2579 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms