RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 STIP1P31948 543 aaKnown RBP13.68□□□□□ -0.22
PRAME-201ENST00000398741 CDH6P55285 790 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 LBX2Q6XYB7 198 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 DPH6Q7L8W6 267 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 RIOX2Q8IUF8 465 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 KIRREL3Q8IZU9 778 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 SLC4A11Q8NBS3 891 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 KCNV2Q8TDN2 545 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 TMEM176AQ96HP8 235 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 ZNF570Q96NI8 536 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 TSSK1BQ9BXA7 367 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 C12orf65Q9H3J6 166 aaKnown RBP13.68□□□□□ -0.22
PRAME-201ENST00000398741 SMYD3Q9H7B4 428 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 RNPEPL1Q9HAU8 725 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 KBTBD13C9JR72 458 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 H7C0C1 242 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 ATP5OP48047 213 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
PRAME-201ENST00000398741 TFDP2Q14188 446 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 EEF1DP3Q658K8 133 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 NPNTQ6UXI9 565 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 CLNKQ7Z7G1 428 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 RFWD2Q8NHY2 731 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 FAF2Q96CS3 445 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 MCRS1Q96EZ8 462 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 APOPT1Q96IL0 206 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 TWNKQ96RR1 684 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 IQCGQ9H095 443 aaKnown RBP13.68□□□□□ -0.22
PRAME-201ENST00000398741 SDCBP2Q9H190 292 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRAME-201ENST00000398741 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 BTBD7Q9P203 1132 aa13.68□□□□□ -0.22
PRAME-201ENST00000398741 IGKV6-21A0A0C4DH24 114 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 TCRBV9S1A1TA0A576 114 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 TRAFD1O14545 582 aaPredicted RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 KIF1CO43896 1103 aaKnown RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 SPAG6O75602 509 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 ITGB3P05106 788 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 NFICP08651 508 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 CALB2P22676 271 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 PCK1P35558 622 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 CCNG1P51959 295 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 NRLP54845 237 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 NOMO1Q15155 1222 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 SH3D19Q5HYK7 790 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 WASHC2DQ5SRD0 308 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 TREML2Q5T2D2 321 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 SYCP2LQ5T4T6 812 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 C1orf127Q8N9H9 656 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 TTC17Q96AE7 1141 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 NUDCD1Q96RS6 583 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 CDT1Q9H211 546 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 FZD8Q9H461 694 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 HMGXB4Q9UGU5 601 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 SIX4Q9UIU6 781 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.67□□□□□ -0.223e-6■■□□□ 14.2
PRAME-201ENST00000398741 PEX11AO75192 247 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 HAUS5O94927 633 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 GJB1P08034 283 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 P4HA1P13674 534 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 GPD1P21695 349 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 GABRB2P47870 512 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 ZNF143P52747 638 aaPredicted RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 ARFIP2P53365 341 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 ZBTB16Q05516 673 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 FAAP100Q0VG06 881 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 KRT81Q14533 505 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 TAF11Q15544 211 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 KBTBD12Q3ZCT8 623 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 PLEKHG4Q58EX7 1191 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 BZW1Q7L1Q6 419 aaKnown RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 LRRC6Q86X45 466 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 IGDCC3Q8IVU1 814 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 TMEM192Q8IY95 271 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 ZNF276Q8N554 614 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 STK32AQ8WU08 396 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 TRAPPC12Q8WVT3 735 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 SLC44A1Q8WWI5 657 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 HEXIM2Q96MH2 286 aaKnown RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 ANKRD27Q96NW4 1050 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 FAM111AQ96PZ2 611 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 GPR20Q99678 358 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 TUBB6Q9BUF5 446 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 ELOVL4Q9GZR5 314 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 DONSONQ9NYP3 566 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 NKX1-2Q9UD57 310 aaPredicted RBP13.67□□□□□ -0.22
PRAME-201ENST00000398741 LNPEPQ9UIQ6 1025 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 SUFUQ9UMX1 484 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 SSC5DA1L4H1 1573 aa13.67□□□□□ -0.22
PRAME-201ENST00000398741 LCTP09848 1927 aa13.66□□□□□ -0.22
PRAME-201ENST00000398741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.66□□□□□ -0.22
PRAME-201ENST00000398741 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
PRAME-201ENST00000398741 E7ENQ6 273 aa13.66□□□□□ -0.22
PRAME-201ENST00000398741 CHADO15335 359 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms