RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SLC22A12Q96S37 553 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 CYP2S1Q96SQ9 504 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 IMPG2Q9BZV3 1241 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 SDCBP2Q9H190 292 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 EBF3Q9H4W6 596 aa14.26□□□□□ -0.13
VCX3A-202ENST00000398729 ATRXP46100 2492 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 CLDN5O00501 218 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 SLC30A4O14863 429 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 HRO43593 1189 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 HLA-DRAP01903 254 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 TRIM21P19474 475 aaKnown RBP14.25□□□□□ -0.13
VCX3A-202ENST00000398729 CACNA2D1P54289 1103 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 AMPD2Q01433 879 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 PON2Q15165 354 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 PDGFRLQ15198 375 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 ST3GAL2Q16842 350 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 EDRF1Q3B7T1 1238 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 ZCWPW2Q504Y3 356 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 C1orf220Q5T0J3 134 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 TRIM68Q6AZZ1 485 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 SMYD4Q8IYR2 804 aaPredicted RBP14.25□□□□□ -0.13
VCX3A-202ENST00000398729 TTC16Q8NEE8 873 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 RIN3Q8TB24 985 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 SLITRK1Q96PX8 696 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 GSDMAQ96QA5 445 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 MED10Q9BTT4 135 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 HPS4Q9NQG7 708 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 GCNT4Q9P109 453 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 HOOK1Q9UJC3 728 aaKnown RBP14.25□□□□□ -0.13
VCX3A-202ENST00000398729 GMEB2Q9UKD1 530 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 ZZEF1O43149 2961 aa14.25□□□□□ -0.13
VCX3A-202ENST00000398729 ZNF840PA6NDX5 716 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 GDF9O60383 454 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 RTN3O95197 1032 aaPredicted RBP14.24□□□□□ -0.13
VCX3A-202ENST00000398729 SMC2O95347 1197 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 RETP07949 1114 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 TRIM49P0CI25 452 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 TRIM49CP0CI26 452 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 EPB41P11171 864 aaKnown RBP14.24□□□□□ -0.13
VCX3A-202ENST00000398729 ARSAP15289 507 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 CXCL12P48061 93 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 GCLMP48507 274 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 IFNAR2P48551 515 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 NDST1P52848 882 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 NRLP54845 237 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 DMWDQ09019 674 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 IFRD2Q12894 506 aaPredicted RBP14.24□□□□□ -0.13
VCX3A-202ENST00000398729 TAF10Q12962 218 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 USP4Q13107 963 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 ZNF77Q15935 545 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 PPM1JQ5JR12 505 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 ZNF658Q5TYW1 1059 aaPredicted RBP14.24□□□□□ -0.13
VCX3A-202ENST00000398729 LAIR1Q6GTX8 287 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 SPOPLQ6IQ16 392 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 FAM35AQ86V20 835 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 UNC93AQ86WB7 457 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 NUP93Q8N1F7 819 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 SPEM1Q8N4L4 309 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 CPA6Q8N4T0 437 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 CCDC150Q8NCX0 1101 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 ENGASEQ8NFI3 743 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 SH3RF2Q8TEC5 729 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 OSCP1Q8WVF1 389 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 SMARCD1Q96GM5 515 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 MMRN2Q9H8L6 949 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 RBM12Q9NTZ6 932 aaKnown RBP14.24□□□□□ -0.13
VCX3A-202ENST00000398729 TMEM30AQ9NV96 361 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 DUS2Q9NX74 493 aaKnown RBP14.24□□□□□ -0.13
VCX3A-202ENST00000398729 ARHGAP26Q9UNA1 814 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 ASPMQ8IZT6 3477 aa14.24□□□□□ -0.13
VCX3A-202ENST00000398729 LAMA1P25391 3075 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 CETN3O15182 167 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 ABL1P00519 1130 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 TCF3P15923 654 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 YWHAQP27348 245 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 HOXC13P31276 330 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 GTF2H1P32780 548 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 PRCPP42785 496 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 ASPAP45381 313 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 SATB1Q01826 763 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 PPP3CAQ08209 521 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 CCINQ13939 588 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 WDR44Q5JSH3 913 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 CRYBG2Q8N1P7 616 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 SYNPOQ8N3V7 929 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 PDZD8Q8NEN9 1154 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 NETO1Q8TDF5 533 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 TAS1R2Q8TE23 839 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 ATP2A3Q93084 1043 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 SMARCE1Q969G3 411 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 FBXO32Q969P5 355 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 EXOC4Q96A65 974 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 TIGD1Q96MW7 591 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 KCNK16Q96T55 309 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 GTPBP4Q9BZE4 634 aaKnown RBP14.23□□□□□ -0.13
VCX3A-202ENST00000398729 CYP3A43Q9HB55 503 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 TMEM8AQ9HCN3 771 aa14.23□□□□□ -0.13
VCX3A-202ENST00000398729 DMAP1Q9NPF5 467 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms