RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PHACTR4Q8IZ21 702 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 MKL1Q969V6 931 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 C17orf80Q9BSJ5 609 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 BRD8Q9H0E9 1235 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 WWP1Q9H0M0 922 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 OSGEPL1Q9H4B0 414 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 GPRC5CQ9NQ84 441 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 CYP39A1Q9NYL5 469 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 SLC39A10Q9ULF5 831 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 V9GYQ6 96 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 KDM1AO60341 852 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 MAP3K7CLP57077 242 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 HIC1Q14526 733 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 NBPF20Q3BBV1 942 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 EFHC1Q5JVL4 640 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 C4orf19Q8IY42 314 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 DDIT4Q9NX09 232 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 PNMA8BQ9ULN7 279 aaPredicted RBP14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 RAD23BP54727 409 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 ZNF200P98182 395 aaPredicted RBP14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 ZNF410Q86VK4 478 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 TSC22D3Q99576 134 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 GIMAP4Q9NUV9 329 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 STOML1Q9UBI4 398 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 NRXN3Q9Y4C0 1643 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 HEATR9A2RTY3 570 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 AP3B1O00203 1094 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 AXLP30530 894 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 PGM1P36871 562 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 ACOT1Q86TX2 421 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 KCNF1Q9H3M0 494 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 GOLPH3Q9H4A6 298 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 UVRAGQ9P2Y5 699 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 OGTO15294 1046 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 DGKIO75912 1065 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 RHOBTB1O94844 696 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 AMPD2Q01433 879 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 BYSLQ13895 437 aaKnown RBP14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 FAM71DQ8N9W8 422 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 BLOC1S5Q8TDH9 187 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 HPS5Q9UPZ3 1129 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 FAM50BQ9Y247 325 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 EPHB2P29323 1055 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 RAP1GDS1P52306 607 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 ABCE1P61221 599 aaKnown RBP14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 PRR23CQ6ZRP0 262 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 ADGRF2Q8IZF7 708 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 ADSSL1Q8N142 457 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 FAM162AQ96A26 154 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 SYTL2Q9HCH5 934 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 TRPM5Q9NZQ8 1165 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 ARHGAP26Q9UNA1 814 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 TAF6LQ9Y6J9 622 aa14.78□□□□□ -0.04
PCDHA11-201ENST00000398640 TARSL2A2RTX5 802 aaKnown RBP14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 AKAP10O43572 662 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 CTNNB1P35222 781 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 STX3Q13277 289 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 PTK7Q13308 1070 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 SH2D3CQ8N5H7 860 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 ZFP42Q96MM3 310 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 YY1AP1Q9H869 796 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 TMEM8AQ9HCN3 771 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 COMTP21964 271 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 HPCAP84074 193 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 STX19Q8N4C7 294 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 NIF3L1Q9GZT8 377 aa14.77□□□□□ -0.04
PCDHA11-201ENST00000398640 MYOM1P52179 1685 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 PMPCBO75439 489 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 ZNF189O75820 626 aaPredicted RBP14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 PDK1Q15118 436 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 DTX3LQ8TDB6 740 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 NRCAMQ92823 1304 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 MAP3K6O95382 1288 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 RARS2Q5T160 578 aaKnown RBP14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 IFNL1Q8IU54 200 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 HES6Q96HZ4 224 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 SMAD5Q99717 465 aaKnown RBP14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 MTMR12Q9C0I1 747 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 TIMM13Q9Y5L4 95 aaPredicted RBP14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 LTBP3Q9NS15 1303 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 CST8O60676 142 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 XYLBO75191 536 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 RGS4P49798 205 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 VSNL1P62760 191 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 INPP5AQ14642 412 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 C3orf62Q6ZUJ4 267 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 FIBCD1Q8N539 461 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 CSGALNACT1Q8TDX6 532 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 FAM129AQ9BZQ8 928 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 SNX12Q9UMY4 172 aa14.77□□□□□ -0.05
PCDHA11-201ENST00000398640 TRADDQ15628 312 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 CLEC4FQ8N1N0 589 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 C1orf131Q8NDD1 294 aaKnown RBP14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 VPS28Q9UK41 221 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 SLC12A8A0AV02 714 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 SMIM10L2AP0DMW4 78 aa14.76□□□□□ -0.05
PCDHA11-201ENST00000398640 SMIM10L2BP0DMW5 78 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms