RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MMS19Q96T76 1030 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 EDEM2Q9BV94 578 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 KBTBD4Q9NVX7 518 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 WASF3Q9UPY6 502 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 CPQQ9Y646 472 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 LAMA1P25391 3075 aa12.84□□□□□ -0.35
TFF3-202ENST00000398431 SCAMP3O14828 347 aaKnown RBP12.83□□□□□ -0.36
TFF3-202ENST00000398431 PTPN1P18031 435 aaKnown RBP12.83□□□□□ -0.36
TFF3-202ENST00000398431 GBP1P32455 592 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 PPP3CCP48454 512 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 NASPP49321 788 aaPredicted RBP12.83□□□□□ -0.36
TFF3-202ENST00000398431 PDE6CP51160 858 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 IRX4P78413 519 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 MRPS21P82921 87 aaKnown RBP12.83□□□□□ -0.36
TFF3-202ENST00000398431 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 ANO7Q6IWH7 933 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 C12orf40Q86WS4 652 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 IL17RCQ8NAC3 791 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 CCDC26Q8TAB7 109 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 B3GNT5Q9BYG0 378 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 ZNF518BQ9C0D4 1074 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 DPEP3Q9H4B8 488 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 SMPD4Q9NXE4 827 aa12.83□□□□□ -0.36
TFF3-202ENST00000398431 SGK1O00141 431 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 CLDN5O00501 218 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 TRIM66O15016 1216 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 CLIC2O15247 247 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 ANXA13P27216 316 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 KIR2DL1P43626 348 aaPredicted RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 NOVA1P51513 510 aaKnown RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 EHHADHQ08426 723 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 PSMD6Q15008 389 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 SNRNP35Q16560 246 aaKnown RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 CNNM4Q6P4Q7 775 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 PAQR9Q6ZVX9 377 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 ALLCQ8N6M5 410 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 TXNDC5Q8NBS9 432 aaKnown RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 LINC00301Q8NCQ3 95 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 OR6B3Q8NGW1 331 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 RLN3Q8WXF3 142 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 ZFRQ96KR1 1074 aaKnown RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 FNBP1Q96RU3 617 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 PNKPQ96T60 521 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 XYLT2Q9H1B5 865 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 AGPAT3Q9NRZ7 376 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 CFAP97Q9P2B7 532 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 MBD1Q9UIS9 605 aaPredicted RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 ASCC3Q8N3C0 2202 aaKnown RBP12.82□□□□□ -0.36
TFF3-202ENST00000398431 PCNX2A6NKB5 2137 aa12.82□□□□□ -0.36
TFF3-202ENST00000398431 CHD6Q8TD26 2715 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 KHNYNO15037 678 aaKnown RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 EIF3DO15371 548 aaKnown RBP eCLIP12.81□□□□□ -0.36
TFF3-202ENST00000398431 ADAM23O75077 832 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 KAT7O95251 611 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 KLF8O95600 359 aaPredicted RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 TOP3BO95985 862 aaKnown RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 ABL1P00519 1130 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 PROS1P07225 676 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 DLATP10515 647 aaKnown RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 TNNI1P19237 187 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 TIE1P35590 1138 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 EIF2DP41214 584 aaKnown RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 P2RY2P41231 377 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 PI4KAP42356 2102 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 MYL6P60660 151 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 CYP24A1Q07973 514 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 WDR72Q3MJ13 1102 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 TDRD10Q5VZ19 366 aaKnown RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 STXBP4Q6ZWJ1 553 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 C11orf74Q86VG3 221 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 NUP93Q8N1F7 819 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 PLEKHO2Q8TD55 490 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 WBP2Q969T9 261 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 CCDC127Q96BQ5 260 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 KCNK16Q96T55 309 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 CGRRF1Q99675 332 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 SNX25Q9H3E2 840 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 ZDHHC4Q9NPG8 344 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 TMEM74BQ9NUR3 256 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 IL37Q9NZH6 218 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 EHD2Q9NZN4 543 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 TFIP11Q9UBB9 837 aaKnown RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 CHORDC1Q9UHD1 332 aaPredicted RBP12.81□□□□□ -0.36
TFF3-202ENST00000398431 HCN2Q9UL51 889 aa12.81□□□□□ -0.36
TFF3-202ENST00000398431 C1QTNF9BB2RNN3 333 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 SLC9A3R1O14745 358 aaPredicted RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 TNFRSF10BO14763 440 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 STAU1O95793 577 aaKnown RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 C1QTNF9P0C862 333 aa12.8□□□□□ -0.36
TFF3-202ENST00000398431 MBL2P11226 248 aaPredicted RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 CSRP1P21291 193 aaKnown RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 DHPSP49366 369 aaPredicted RBP12.8□□□□□ -0.36
TFF3-202ENST00000398431 CDH8P55286 799 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms