RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SPOCK2Q92563 424 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 WDR83Q9BRX9 315 aaKnown RBP19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ASB7Q9H672 318 aa19.2■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ASB14A6NK59 587 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FAM187BQ17R55 369 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FASTKD5Q7L8L6 764 aaKnown RBP19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ZC3H18Q86VM9 953 aaKnown RBP19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 NAT8LQ8N9F0 302 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SPDYE1Q8NFV5 336 aaPredicted RBP19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CMASQ8NFW8 434 aaPredicted RBP19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PYROXD1Q8WU10 500 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 E5RJQ4 531 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TMEM63AO94886 807 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RBP3P10745 1247 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 VDRP11473 427 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GJA5P36382 358 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ADCYAP1R1P41586 468 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GABRB2P47870 512 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 OR6B2Q6IFH4 312 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TDRPQ86YL5 185 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SPATA18Q8TC71 538 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TBC1D31Q96DN5 1066 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TSPAN16Q9UKR8 245 aa19.19■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ASMTLO95671 621 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 HMGCRP04035 888 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ATICP31939 592 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RPA3P35244 121 aaPredicted RBP19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RGS7P49802 495 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 BASP1P80723 227 aaKnown RBP19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 IL9RQ01113 521 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 LAMC2Q13753 1193 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MAMDC4Q6UXC1 1216 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 LINC01465Q8N7H1 131 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RMDN2Q96LZ7 410 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 DPP3Q9NY33 737 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 BARX2Q9UMQ3 279 aaPredicted RBP19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GINS2Q9Y248 185 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CENPFP49454 3210 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 APOC4-APOC2K7ER74 178 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 APOC2P02655 101 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 P4HA1P13674 534 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CDH6P55285 790 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 DNAJC3Q13217 504 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 C3orf62Q6ZUJ4 267 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FAM183BPQ6ZVS7 135 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PCGF5Q86SE9 256 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RXFP2Q8WXD0 754 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SMC6Q96SB8 1091 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PITPNM3Q9BZ71 974 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CYP3A43Q9HB55 503 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ASNSD1Q9NWL6 643 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GRID1Q9ULK0 1009 aa19.18■□□□□ 0.66
CHRFAM7A-202ENST00000397827 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PDGFRAP16234 1089 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ARL4CP56559 192 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 BBS9Q3SYG4 887 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TBC1D1Q86TI0 1168 aaPredicted RBP19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FBXO36Q8NEA4 188 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ACAP3Q96P50 834 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MAK16Q9BXY0 300 aaKnown RBP19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 VRTNQ9H8Y1 702 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RABGEF1Q9UJ41 708 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ARL2BPQ9Y2Y0 163 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MCF2LO15068 1137 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TSPAN1O60635 241 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GSTA1P08263 222 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CA4P22748 312 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ADORA2AP29274 412 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ZNF143P52747 638 aaPredicted RBP19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 ATP11AP98196 1134 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 POU5F1BQ06416 359 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 NR1H3Q13133 447 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MTHFD1LQ6UB35 978 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CYP4V2Q6ZWL3 525 aaPredicted RBP19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FITM2Q8N6M3 262 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 DENND1AQ8TEH3 1009 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PPP1R13LQ8WUF5 828 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 KIF12Q96FN5 646 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 UBN1Q9NPG3 1134 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RNF19AQ9NV58 838 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PRKAG3Q9UGI9 489 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 XPO7Q9UIA9 1087 aaKnown RBP19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PNMA3Q9UL41 463 aa19.17■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TRIP11Q15643 1979 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MAGEB2O15479 319 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 GPD1P21695 349 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 RPS6KA3P51812 740 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MGAT5Q09328 741 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MTFR1Q15390 333 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CCDC63Q8NA47 563 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 C16orf70Q9BSU1 422 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SLCO1B3Q9NPD5 702 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 PSMC3IPQ9P2W1 217 aaPredicted RBP19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 C2CD4BA6NLJ0 364 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 MAP3K6O95382 1288 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 TMEM62Q0P6H9 643 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 SLC1A5Q15758 541 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 FBF1Q8TES7 1133 aa19.16■□□□□ 0.66
CHRFAM7A-202ENST00000397827 CITO14578 2027 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms