RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 RAPH1Q70E73 1250 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NLRP9Q7RTR0 991 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 LRRC6Q86X45 466 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CMASQ8NFW8 434 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 HDAC11Q96DB2 347 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ZWILCHQ9H900 591 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 KMT5AQ9NQR1 393 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TRIM33Q9UPN9 1127 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 BCS1LQ9Y276 419 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 THSD7AQ9UPZ6 1657 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 H0YIN7 160 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ADRB2P07550 413 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ARCQ7LC44 396 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ECHDC2Q86YB7 292 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 RNF169Q8NCN4 708 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SCG3Q8WXD2 468 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 CEP19Q96LK0 163 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 MYLK2Q9H1R3 596 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ARHGAP26Q9UNA1 814 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SFI1A8K8P3 1242 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 DAB1O75553 588 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 TRPC1P48995 793 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 R3HDM1Q15032 1099 aaKnown RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SPOPLQ6IQ16 392 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 ARHGEF19Q8IW93 802 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 PPIL6Q8IXY8 311 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 AGR3Q8TD06 166 aa5.68□□□□□ -1.5
PTPRD-205ENST00000397611 SLC7A6OSQ96CW6 309 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 NR1H4Q96RI1 486 aaPredicted RBP5.68□□□□□ -1.5
PTPRD-205ENST00000397611 QSER1Q2KHR3 1735 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 UNCXA6NJT0 531 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 LIASO43766 372 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CNTFP26441 200 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ADSLP30566 484 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 MRPS15P82914 257 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 NAB1Q13506 487 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ATP1A4Q13733 1029 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 FSCBQ5H9T9 825 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 PLA2G4FQ68DD2 849 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 LVRNQ6Q4G3 990 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SEPT12Q8IYM1 358 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ALLCQ8N6M5 410 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SLC16A10Q8TF71 515 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 TEX13BQ9BXU2 312 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 NIFKQ9BYG3 293 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CHST7Q9NS84 486 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ADAMTS5Q9UNA0 930 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 FARP1Q9Y4F1 1045 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 NAV1Q8NEY1 1877 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 RNF103-CHMP3A0A140T963 221 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 GOLGA8IPA6NC78 632 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 GOLGA8JA6NMD2 632 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 C19orf81C9J6K1 198 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SHBGP04278 402 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 INPP1P49441 399 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SERPINB9P50453 376 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 METTL21CQ5VZV1 264 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 GJB7Q6PEY0 223 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 IFNLR1Q8IU57 520 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 DDHD1Q8NEL9 900 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 FAM192AQ9GZU8 254 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 C2orf40Q9H1Z8 148 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 GIMAP4Q9NUV9 329 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SLC5A4Q9NY91 659 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ADA2Q9NZK5 511 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 A6NHS1 94 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 TRDMT1O14717 391 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 HLA-DRAP01903 254 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 MLNP12872 115 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SLC18A2Q05940 514 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 PPP1R15BQ5SWA1 713 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SYCP2LQ5T4T6 812 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CLNKQ7Z7G1 428 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 PPM1NQ8N819 430 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 RBBP8NLQ8NC74 664 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SHCBP1LQ9BZQ2 653 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SLC13A1Q9BZW2 595 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CCDC90BQ9GZT6 254 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 UPF3AQ9H1J1 476 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 UBAP1Q9NZ09 502 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 DTNAQ9Y4J8 743 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 PCDHB4Q9Y5E5 795 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ATAD5Q96QE3 1844 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 KBTBD13C9JR72 458 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 RIMBP2O15034 1052 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CCDC159P0C7I6 412 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 HOXA13P31271 388 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 KCNJ1P48048 391 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 UBXN2AP68543 259 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 GRIK3Q13003 919 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 DNAJC24Q6P3W2 148 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SLC25A41Q8N5S1 370 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ZNF606Q8WXB4 792 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 POMGNT1Q8WZA1 660 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 KAT5Q92993 513 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 EPB41L1Q9H4G0 881 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CYP39A1Q9NYL5 469 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms