RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 B3GNT9Q6UX72 402 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 FAM131BQ86XD5 332 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SCUBE3Q8IX30 993 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 GANCQ8TET4 914 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 BTBD6Q96KE9 485 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 FBXL18Q96ME1 805 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SERPINB11Q96P15 392 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 RPRD1AQ96P16 312 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 OGFRQ9NZT2 677 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 TTC7AQ9ULT0 858 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 NFU1Q9UMS0 254 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SQORQ9Y6N5 450 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CAPN6Q9Y6Q1 641 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 RGPD3A6NKT7 1758 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 RGPD4Q7Z3J3 1758 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 COL4A1P02462 1669 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 KCNN4O15554 427 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 CST3P01034 146 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SLC4A1P02730 911 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PRLRP16471 622 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 PBX1P40424 430 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 MSH2P43246 934 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ARSEP51690 589 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 P3H1Q32P28 736 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 IL31Q6EBC2 164 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 DENND1BQ6P3S1 775 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ANKS4BQ8N8V4 417 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 SNF8Q96H20 258 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 FRMD8P1Q9BZ68 369 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-204ENST00000397606 MUC3BQ9H195 1237 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 POPDC2Q9HBU9 364 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 AMACRQ9UHK6 382 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 RWDD3Q9Y3V2 267 aa8.64□□□□□ -1.03
PTPRD-204ENST00000397606 ABHD14A-ACY1A0A1B0GW23 586 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 GOLGA8KD6RF30 607 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 LTFP02788 710 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 RBP3P10745 1247 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 MYL4P12829 197 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 COPS2P61201 443 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 DENND5BQ6ZUT9 1274 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 NYAP1Q6ZVC0 841 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 CCDC110Q8TBZ0 833 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PDCD6IPQ8WUM4 868 aaKnown RBP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ARHGEF26Q96DR7 871 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ADAM28Q9UKQ2 775 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 AP4E1Q9UPM8 1137 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ZNF185O15231 689 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PJA2O43164 708 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PSMD3O43242 534 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ATP8B1O43520 1251 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 EIF3BP55884 814 aaKnown RBP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ZBTB16Q05516 673 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 FPGSQ05932 587 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 GEN1Q17RS7 908 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 TFDP3Q5H9I0 405 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 CNKSR3Q6P9H4 555 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 C4orf22Q6V702 233 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 SLC13A5Q86YT5 568 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 AFAP1L2Q8N4X5 818 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PDZD8Q8NEN9 1154 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 EXD1Q8NHP7 514 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 SPPL2BQ8TCT7 592 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 MS4A14Q96JA4 679 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 TTC25Q96NG3 672 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ULBP1Q9BZM6 244 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 MED4Q9NPJ6 270 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 FLRT1Q9NZU1 646 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 COQ4Q9Y3A0 265 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 IGKV6-21A0A0C4DH24 114 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 STK25O00506 426 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PFKMP08237 780 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 GLUD2P49448 558 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ZNF177Q13360 481 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PIGZQ86VD9 579 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 MICALL1Q8N3F8 863 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 MYLPFQ96A32 169 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PABPC5Q96DU9 382 aaKnown RBP8.63□□□□□ -1.03
PTPRD-204ENST00000397606 KREMEN1Q96MU8 473 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 SAYSD1Q9NPB0 183 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 NT5C1B-RDH14C9J2C7 533 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 CRCPO75575 148 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 CSH1P0DML2 217 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 CSH2P0DML3 217 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 CAPN2P17655 700 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 PSEN1P49768 467 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 LILRA4P59901 499 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 TRIM60Q495X7 471 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 HERC6Q8IVU3 1022 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 CCT6BQ92526 530 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 EDEM1Q92611 657 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 RUBCNQ92622 972 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ZIC5Q96T25 663 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 ABCC13Q9NSE7 274 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 LMCD1Q9NZU5 365 aa8.63□□□□□ -1.03
PTPRD-204ENST00000397606 MYH4Q9Y623 1939 aa8.62□□□□□ -1.03
PTPRD-204ENST00000397606 ARHGAP42A6NI28 874 aa8.62□□□□□ -1.03
PTPRD-204ENST00000397606 SYN3O14994 580 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms