RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TMEM132DQ14C87 1099 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 SMAD1Q15797 465 aaKnown RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 ZNF77Q15935 545 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 HSF5Q4G112 596 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 COLEC12Q5KU26 742 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 SYCP2LQ5T4T6 812 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 DHRS13Q6UX07 377 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 PRICKLE2Q7Z3G6 844 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 SFTPA1Q8IWL2 248 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 DCP1BQ8IZD4 617 aaKnown RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 BAHD1Q8TBE0 780 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 TRMT2BQ96GJ1 504 aaKnown RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 MYRFLQ96LU7 910 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 ASB7Q9H672 318 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 GAREM1Q9H706 876 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 TRPC7Q9HCX4 862 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 CPSF3Q9UKF6 684 aaKnown RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 MAGED2Q9UNF1 606 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-203ENST00000397378 C2CD2Q9Y426 696 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 PCDHB5Q9Y5E4 795 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 COL12A1Q99715 3063 aa10.13□□□□□ -0.79
NEDD9-203ENST00000397378 IGHV1OR15-9A0A0B4J2B8 117 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 HNRNPDLO14979 420 aaKnown RBP10.12□□□□□ -0.79
NEDD9-203ENST00000397378 NDUFS2O75306 463 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 NOL4O94818 638 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 CER1O95813 267 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 CKMP06732 381 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 NFICP08651 508 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 USP17L7P0C7H9 530 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 C6P13671 934 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 GABRG2P18507 467 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 MAOBP27338 520 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 MATKP42679 507 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 TOB1P50616 345 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-203ENST00000397378 SLC12A3P55017 1021 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 RHDQ02161 417 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 CCDC173Q0VFZ6 552 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 IL17AQ16552 155 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 NFE2Q16621 373 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-203ENST00000397378 EMC10Q5UCC4 262 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 WSCD1Q658N2 575 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 PYM1Q9BRP8 204 aaKnown RBP10.12□□□□□ -0.79
NEDD9-203ENST00000397378 ABCB6Q9NP58 842 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 CALCOCO1Q9P1Z2 691 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
NEDD9-203ENST00000397378 CYP8B1Q9UNU6 501 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.12□□□□□ -0.79
NEDD9-203ENST00000397378 PCDHB6Q9Y5E3 794 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 PTPN13Q12923 2485 aa10.12□□□□□ -0.79
NEDD9-203ENST00000397378 USP9XQ93008 2570 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-203ENST00000397378 TRAV19A0A0A6YYK7 116 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 MYMKA6NI61 221 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 ADAM23O75077 832 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 CILPO75339 1184 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 PRPF40AO75400 957 aaKnown RBP10.11□□□□□ -0.79
NEDD9-203ENST00000397378 APODP05090 189 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 ZNF883P0CG24 379 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 JUPP14923 745 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 RPL10AP62906 217 aaKnown RBP10.11□□□□□ -0.79
NEDD9-203ENST00000397378 TSPY1Q01534 308 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 POU5F1Q01860 360 aaKnown RBP10.11□□□□□ -0.79
NEDD9-203ENST00000397378 TLE3Q04726 772 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 GNL2Q13823 731 aaKnown RBP10.11□□□□□ -0.79
NEDD9-203ENST00000397378 WDR45BQ5MNZ6 344 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 DTHD1Q6ZMT9 781 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 KIAA1958Q8N8K9 716 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 STKLD1Q8NE28 680 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 SLC22A12Q96S37 553 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 LLPHQ9BRT6 129 aaKnown RBP10.11□□□□□ -0.79
NEDD9-203ENST00000397378 MSTO1Q9BUK6 570 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 TRIM4Q9C037 500 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 LINC00597Q9H2U6 94 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 TMLHEQ9NVH6 421 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 DPP3Q9NY33 737 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 GCNT4Q9P109 453 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 ODF2LQ9ULJ1 636 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 FNDC3AQ9Y2H6 1198 aaKnown RBP10.11□□□□□ -0.79
NEDD9-203ENST00000397378 MGAQ8IWI9 3026 aa10.11□□□□□ -0.79
NEDD9-203ENST00000397378 A0A1B0GTW7 788 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 MEI4A8MW99 385 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 KPNA7A9QM74 516 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 ZBTB24O43167 697 aaPredicted RBP10.1□□□□□ -0.79
NEDD9-203ENST00000397378 TNFSF14O43557 240 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 ZNF217O75362 1048 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 PLA2G4BP0C869 781 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 ABCD1P33897 745 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 HNF1BP35680 557 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 GPR15P49685 360 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 NEK4P51957 841 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 HMGN5P82970 282 aaKnown RBP10.1□□□□□ -0.79
NEDD9-203ENST00000397378 KDSRQ06136 332 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 MYO1EQ12965 1108 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 GAB4Q2WGN9 574 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 SV2CQ496J9 727 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 ARSHQ5FYA8 562 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 SLC39A4Q6P5W5 647 aa10.1□□□□□ -0.79
NEDD9-203ENST00000397378 TMPRSS12Q86WS5 348 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms